Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1621 |
Symbol | |
ID | 3960485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1753133 |
End bp | 1755283 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916445 |
Product | pyridine nucleotide-disulphide oxidoreductase dimerisation protein |
Protein accession | YP_522883 |
Protein GI | 89900412 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.143809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TATTAATTCT TAGCGCTGCT GCCTTGTTGG TATTCGGTTT CTTTGCACTG GATTTGAACC GCTACCTGAC ACTCGATGGC ATGAAAGCCA GTCTGGGTCA ATTTGAGTCG CAACGTGCCG CGTCACCCGT TGTGGTTGGG CTGGTCTTCT TTTCAGTCTA CGTGGTGGTC ACAGCGATGT CACTGCCGGG TGCTGCGATA TTGACCCTTG CTGCCGGTGC TTTGTTTGGC TTGTCCATGG GCACGTTGAT TGTGTCGTTT GCGTCAAGCA TCGGCGCTAC CCTGGCTTTT CTGGCATCAC GCTACGTGTT GCGCGATGCC ATCCAGCGCC GTTTTGGTGA TCGGCTCAAA GTCATCAACG AAGGCATGGC CAAAGATGGC GCGCTGTATC TGTTCACGCT GCGTCTGGTG CCCCTATTTC CGTTCTTCCT GGTCAATTTG CTCATGGGCC TGACACCGGT TCGTACACTG AGCTACTACT GGGTCAGCCA GGTGGGCATG CTGGCTGGCA CCCTGGTTTA TGTGAATGCC GGCACCCAAC TGGCCCAAAT CAACAGCTTG GTCGGTATTG TGTCGCCCGG CCTCTTGCTT TCCTTTGCAC TACTGGGCGT ATTCCCCATG CTGGCCAAGA TGTTTATGCG TTTGCTGCAA GGTCGCCGCG TGTATGCCAA ATGGCAACGC CCCAAAAAAT TTGACCGCAA CTTGGTGGTC ATTGGTGGCG GCGCGGCAGG TTTGGTTACT TCCTATATTG CGGCAGCCGT CAAGGCCAAG GTGACCTTGG TTGAAGCCCA CAGGATGGGG GGTGACTGCC TCAACTACGG CTGTGTACCC AGCAAGGCCC TGATCAAGTC AGCCCGCATC GCCAATCAAA TGCGCCATGC CGAAAGTTAT GGCCTGAGTG CAGCAGAACC ACAGTTCAGT TTTCGCAAAG TGATGGCCAG AGTGCATGAA GTGATACGCA CGGTGGAGCC ACACGACAGC GTGGCGCGCT ACACCGAACT CGGAGTGGAA GTGCTGGAGG GTTATGCACG CATCGTCGAC CCCTGGACAG TGGAAATCAA GCTCAACAAC GGCGGCATGC AGCGCCTGAC GACCCGCAGC ATCGTCATTG CAGCCGGGGC CAGCCCGTTT GTGCCACCGC TGCCCGGTCT GGCTGATGTG GGTTATGTCA CCAGTGACAC GCTGTGGGAC GAATTTGCCA AGCTGGACGC GGCCCCAAAG CGACTGGTGG TGCTGGGCGG TGGCCCCATT GGCTGCGAGT TGGCGCAGAG TTTTGCCCGT TTGGGCTCCA AGGTGACTCA AATCGAGATG GCTCCGCGCA TCATGATCCG CGAAGACCTG GAAGTCTCCG ATCTGGCCCG TGACTCATTG AGGCGCGATG GCATTGACGT TTTGACAGGT CACAAAGCCC TGCGATGCGA GCGGGAGGGG ACTCGCAAAT TCATCGTGGC TGAGCATCAG GGCAAAGAGA TACGCATCGA ATTTGATGCC TTGCTGTGCG CGGTCGGGCG CGTGGCCCGT TTGCAGGGCT ATGGCCTGGA AGAGCTGGGG ATTCCCACCC AACGCACCGT GGCGGTTAAC GATTACCTGG AGACCCTGTA CCCGAACATC TATGCGGCCG GCGATGTGGC CGGGCCTTAT CAATTTACCC ACACGGCTGG CCACATGGCG TGGTACGCCG CTGTCAACGC GCTGTTCGGC GACTTCAAGA GATTCAAGGT GGATTACTCA GTGGTGCCCT GGGCGACTTT CATCCAACCC GAGGTGGCTC GGGTTGGACT CAACGAGCAA GATGCCAAGG AGAAAGGCAT TGCTCATGAA GTTACCAAAT ACGGCCTGGA TGACCTGGAC CGCGCCATTG CCGACGGCAC GGCGTACGGT TTTGTGAAAG TGCTCACCGT CCCCGGCAAA GACCGCATTC TGGGTGTGAC CATCGTTGGT GAGCACGCCG GGGATTTGCT GGCCGAATTC GTGCTGGCCA CGAAGCATGG TTTGGGTTTG AACAAGATTC TGGGCACCAT TCACACCTAC CCGACGCTGG CAGAGGCAAA TAAGTACGTT GCCGGTGAAT GGAAGCGTGC GCACGCGCCT CAAAAAGTGC TGGCCCTGTT GGCACGCTTT CATGCCTGGA AGCGAGGCTA A
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Protein sequence | MKKLLILSAA ALLVFGFFAL DLNRYLTLDG MKASLGQFES QRAASPVVVG LVFFSVYVVV TAMSLPGAAI LTLAAGALFG LSMGTLIVSF ASSIGATLAF LASRYVLRDA IQRRFGDRLK VINEGMAKDG ALYLFTLRLV PLFPFFLVNL LMGLTPVRTL SYYWVSQVGM LAGTLVYVNA GTQLAQINSL VGIVSPGLLL SFALLGVFPM LAKMFMRLLQ GRRVYAKWQR PKKFDRNLVV IGGGAAGLVT SYIAAAVKAK VTLVEAHRMG GDCLNYGCVP SKALIKSARI ANQMRHAESY GLSAAEPQFS FRKVMARVHE VIRTVEPHDS VARYTELGVE VLEGYARIVD PWTVEIKLNN GGMQRLTTRS IVIAAGASPF VPPLPGLADV GYVTSDTLWD EFAKLDAAPK RLVVLGGGPI GCELAQSFAR LGSKVTQIEM APRIMIREDL EVSDLARDSL RRDGIDVLTG HKALRCEREG TRKFIVAEHQ GKEIRIEFDA LLCAVGRVAR LQGYGLEELG IPTQRTVAVN DYLETLYPNI YAAGDVAGPY QFTHTAGHMA WYAAVNALFG DFKRFKVDYS VVPWATFIQP EVARVGLNEQ DAKEKGIAHE VTKYGLDDLD RAIADGTAYG FVKVLTVPGK DRILGVTIVG EHAGDLLAEF VLATKHGLGL NKILGTIHTY PTLAEANKYV AGEWKRAHAP QKVLALLARF HAWKRG
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