Gene Rfer_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1544 
Symbol 
ID3960533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1660201 
End bp1661766 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content63% 
IMG OID637916363 
Producthypothetical protein 
Protein accessionYP_522807 
Protein GI89900336 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAT CGGCAGAAAT CGGCCACAAG ATTGGCAAAG CCGCCTACCG CGAGGCGGTG 
CCGTTGTTGC GCGCCGCCTT GCTCGAAGCG CAGGTGGATT TGTTCGCGGA CAAAAAGATT
CCGGTGCTGG TGCTGATCAG TGGCCAGGAC GGCGCCGGCA AAGGCGAAAC CATCAATGTG
CTGTACGAGT GGATGGACCC GCGCTTTATG GCCACGCTGG CGTTTTCCGA GCCCACTGAT
GAGGAGCGCG AACGCCCGCC GATGTGGCGC TACTGGCGCC AGCTGCCGCC CAAGGGCCGC
ATCGGCATCT TTGCCGGTTC CTGGTATTCG GACCCGATAC GCGAACGCAT TCAGGGTGAC
ATCTCCCTCA AAGAGCTTGA TGCCCGGGCC GAGCAGATCA ACCGCTTTGA GGCCATGCTG
GTTAATGAAG GCGCGCTGGT GCTCAAGTTC TGGTTTCACT TGACCAAGCA GGGGCAGAAA
GACCGGCTCA AGGCGCTGGA GGCCGACCCG CATACCGCCT GGCGCGTGAC GCAATGGAAC
TGGGACCGCC TCAAGACCTA CGATAAGCTG CAAGACGTGG CGGGCCATTT GCTGCGCATC
ACCAACACGC CGTGGGCACC CTGGGTGGTG GTGGAGGGGG CTGATGACCG CTACCGCTCT
CTCACGGTAG GCCAGGTCTT GCTGGCCGCG TTGAAGAGTC GCCTGGCTGA CACTGAGCCT
CAGGAGTCAC CGGTGGCGCC GATGGTGCGG GTCGATACCG ACGGCCGCAA TGTGCTCTCG
CAGCTTGATC TGGGCCTGCA GTTGGCCGAC AAGCCTTATG AGCGCGAGCT GGCGCGCTGG
CAGGGGCGCC TCGCCGAGCT GATGCGCGAT CCGCGCTTCA AGGGCCGCTC GCTGGTCTGC
GCGTTTGAAG GCGCAGACGC CGCTGGCAAA GGTGGAGCCA TCCGGCGCAT TGCAGGCGCC
CTGGACGCGC GCCAATACCA GGTGATTGCA GTGGCAGCGC CGACCGATGA AGAGCGGGCA
CAACCGCATC TGTGGCGCTT TTGGCGCCAC CTGCCGCGCC ACGGCCATGC GACCATTTTT
GACCGCACCT GGTACGGCCG GGTGCTGGTG GAACGGGTGG AGGGCCTTTG CGCGGAACAC
GACTGGCTGC GCGCTTACAC CGAGATCAAT GACTTTGAGC ATGAGATGGC CGAGGCCGGG
GTGGTGGTGG TCAAGTTCTG GCTGCAGATC AGCCAGGCGG AGCAACTTGA ACGCTTCAAG
GCGCGCGAGC AGGTTGAATT CAAGCGCTTC AAGATCACCG AGGAAGACTG GCGCAACCGC
GACAAATGGG ACGCCTACCA GCAGGCGATT TGCGACATGG TGGAGCGCAC CAGCACCGGC
AACGCGCCCT GGACCCTGGT GGAGGCGAAT GACAAAAACT ATGCGCGCAT CAAAATCTTG
CGCACGCTGT GTGAACGCCT GCAGGCCGAA TTTGACAACA CGCCGCAGGT GGACGCCGCA
GTCGGTCGCC AGAAGACGGA CAAACCCGCC AAGCACAAGA ACGCCGGCAA AAAGTCGGCC
AAGTGA
 
Protein sequence
MFESAEIGHK IGKAAYREAV PLLRAALLEA QVDLFADKKI PVLVLISGQD GAGKGETINV 
LYEWMDPRFM ATLAFSEPTD EERERPPMWR YWRQLPPKGR IGIFAGSWYS DPIRERIQGD
ISLKELDARA EQINRFEAML VNEGALVLKF WFHLTKQGQK DRLKALEADP HTAWRVTQWN
WDRLKTYDKL QDVAGHLLRI TNTPWAPWVV VEGADDRYRS LTVGQVLLAA LKSRLADTEP
QESPVAPMVR VDTDGRNVLS QLDLGLQLAD KPYERELARW QGRLAELMRD PRFKGRSLVC
AFEGADAAGK GGAIRRIAGA LDARQYQVIA VAAPTDEERA QPHLWRFWRH LPRHGHATIF
DRTWYGRVLV ERVEGLCAEH DWLRAYTEIN DFEHEMAEAG VVVVKFWLQI SQAEQLERFK
AREQVEFKRF KITEEDWRNR DKWDAYQQAI CDMVERTSTG NAPWTLVEAN DKNYARIKIL
RTLCERLQAE FDNTPQVDAA VGRQKTDKPA KHKNAGKKSA K