| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1538 |
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| Symbol | |
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| ID | 3960692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1655025 |
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| End bp | 1656512 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916357 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_522801 |
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| Protein GI | 89900330 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGACAC CTCTTTCTGA AGACACCGCG CGCAAGCTCG ATATTGGCTA TCGGCTGCTG
TTTGAGAAAA GTCCGCTGCC GATGTGGGTT TATGACGTGC AAACACTGGG CATGCTGGCC
GTCAACGACG CCGCCCTGGC GCAGTATGGG TACAGCAAGC AGGCGTTTGT CGGCTTGAGC
GTGCTTGACC TTCATCCGCC AGACGAAGCG GCGCAAGCGC AGCAACACCT GCAACTGGCG
AGTGGCGAGC CCGTAACCCA GACACTGTGG CGGCACCGGC TCGCCAATGG TGACCTGATT
GACGTCGAGG TGGTGACCGA ATATGTTGAA CTTGACGGCA TCCAGGCGCG CCTCGCGCTG
GTGCGCGATC TGACGGCGCA GCAGCGTGCC AAGCAGCAAC TGCAAGAGGA GCACCAGACA
CTGGCTGCTG TGCTGGACTC GACCACCGAT GCCATCATCA GCATCACGGT TGAAGGCTTG
ATCAAAGTGT TCAACCCTGG CGCCGAGCGC ATCTTTGGTT ACAGTCGTGA GCGAATGCTG
GGTCAAAACA TGGCACTGCT GTTGCCTGAA CGCTATCGGG CCGAGCATCC GCAGCAGCTG
CGCTCATTTG CCGACTCCGG GGCGACCAGC CACATGATGG GCATGGGCGT TGTCAAAGGC
TTGCGCGCCG ACGGCCAGGA ACTGGACCTG GAAGGCACAC TCTCACAGGT GATCGTCCAC
CAGGAGCGGC GGCTGATTGC CTGCCTGCGT GATGTCACGG AGCGCGCCCG CTCGCAAGCC
AAATTCCGGC AGTCCAGGGC GCAACTCTCG GAGCTGACGC AACGGCTCAT GACGCAGGAA
AAAACATTGG TGAAGCAGTT GGCCAAGACG CTGCATGACC AATTGGGCCA GACACTGGCC
GCGGTTCGCA TGGCGCATGA AACCATTCAG GCCGTGCAAC CCAAAGATAC CCCGGTCGCC
GTGCAGAGGC AACAGGCGCA ACTGGGCAAG CTCGTTGGCC ATGCAATCCA GCAGGTCAGG
CAAGTGCTGG TTGATTTGCG TCCCCCCTTG CTGGAGGACC AGGGGCTCGT CGCCGCGCTC
GACAATGAGT TGCGCAACCG TTCGCTGACC CAACCCCAGA TCGACTTCTC GATTGACGTG
CCGCCGGAGA TTGAGCCGAT GCGCTGGCCC GGTGAGGTTG AATATGCGGC CTTCATGGTG
GCCCGCGAGG CACTTGAAAA CGCCTTGCGC CACGCGAACG CGTCGGCCAT CGCGGTGCGT
CTGGTGGGCA CGCAGCAGTC ATTGCAGTTG CAGGTGTCTG ATAACGGGGT CGGCATCCCG
GCCGGCGCCG CTGTTCCAAG TGGTCACCTG GGGGTATTCG GTATGCACGA GCGGGCGCAG
GCGATTGGTG CGACGGTGAC GGTGGGCGCC GGTGAAGGCC GTGGTACATG TGTAAGTTTT
TATTGGCAGC CTGAGCCTGA TTCTGATTCT GAATGGGGTG CCCTATGA
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| Protein sequence | METPLSEDTA RKLDIGYRLL FEKSPLPMWV YDVQTLGMLA VNDAALAQYG YSKQAFVGLS
VLDLHPPDEA AQAQQHLQLA SGEPVTQTLW RHRLANGDLI DVEVVTEYVE LDGIQARLAL
VRDLTAQQRA KQQLQEEHQT LAAVLDSTTD AIISITVEGL IKVFNPGAER IFGYSRERML
GQNMALLLPE RYRAEHPQQL RSFADSGATS HMMGMGVVKG LRADGQELDL EGTLSQVIVH
QERRLIACLR DVTERARSQA KFRQSRAQLS ELTQRLMTQE KTLVKQLAKT LHDQLGQTLA
AVRMAHETIQ AVQPKDTPVA VQRQQAQLGK LVGHAIQQVR QVLVDLRPPL LEDQGLVAAL
DNELRNRSLT QPQIDFSIDV PPEIEPMRWP GEVEYAAFMV AREALENALR HANASAIAVR
LVGTQQSLQL QVSDNGVGIP AGAAVPSGHL GVFGMHERAQ AIGATVTVGA GEGRGTCVSF
YWQPEPDSDS EWGAL
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