Gene Rfer_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1521 
Symbol 
ID3960675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1638346 
End bp1639122 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID637916340 
ProductABC transporter related 
Protein accessionYP_522784 
Protein GI89900313 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTT CCACCCTCAA ACTCCAGGCA GAAAACATTC ACAAACGCTT CGGCAGTGTC 
GAGGTACTCA AAGGTGTATC GCTGACCGCC CATGCCGGTG ACGTGATCAG CATCATCGGC
AGTTCAGGTT CGGGCAAAAG CACGTTTTTG CGCTGCATCA ACCTGCTGGA GAAGCCGCAC
CAGGGCCGCA TTGTGGTGGC CGGTGAAGAG CTCAAGCTAG TGCCGGGCGC CAATGGCGAG
CTCGGTGCCT CCGACCCCAA ACAGCTCCAG CGCATGCGCA CCAAGCTGGC CATGGTGTTC
CAGCATTTCA ATCTGTGGGC CCACATGACG GTGTTGCAAA ACATCATCGA AGCGCCGGTC
CATGTGATGG GAGTTCCCCG CGATCAGGCG GTGGAGATTG CGCGCAAATA CCTCAAGCGG
GTCGATCTGG CCGGCATGGA AGACCGCTAC CCGGCGCACA TGAGCGGCGG CCAGCAGCAG
CGCGTGGCGA TAGCTCGCGC GCTGGCGATG GAGCCCGAAG TGATGCTGTT TGACGAACCC
ACCAGTGCGC TTGACCCCGA GCTGGTGTCC GAGGTGCTCA AGGTCATGAA GAACCTGGCG
CTGGAGGGCC GCACCATGGT GGTGGTGACG CATGAAATGG GTTTTGCGCG CGACGTGTCC
AACCATCTCA TCTTCTTGCA CAAAGGGCTG ATCGAGGAAG AAGGCAAGCC GGCGCAGGTG
CTGGCCAACC CAAAAAGTGA GCGACTGGCG CAGTTTTTAT CCGGCAGCCT GAAGTAG
 
Protein sequence
MTTSTLKLQA ENIHKRFGSV EVLKGVSLTA HAGDVISIIG SSGSGKSTFL RCINLLEKPH 
QGRIVVAGEE LKLVPGANGE LGASDPKQLQ RMRTKLAMVF QHFNLWAHMT VLQNIIEAPV
HVMGVPRDQA VEIARKYLKR VDLAGMEDRY PAHMSGGQQQ RVAIARALAM EPEVMLFDEP
TSALDPELVS EVLKVMKNLA LEGRTMVVVT HEMGFARDVS NHLIFLHKGL IEEEGKPAQV
LANPKSERLA QFLSGSLK