Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1521 |
Symbol | |
ID | 3960675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1638346 |
End bp | 1639122 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916340 |
Product | ABC transporter related |
Protein accession | YP_522784 |
Protein GI | 89900313 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCACTT CCACCCTCAA ACTCCAGGCA GAAAACATTC ACAAACGCTT CGGCAGTGTC GAGGTACTCA AAGGTGTATC GCTGACCGCC CATGCCGGTG ACGTGATCAG CATCATCGGC AGTTCAGGTT CGGGCAAAAG CACGTTTTTG CGCTGCATCA ACCTGCTGGA GAAGCCGCAC CAGGGCCGCA TTGTGGTGGC CGGTGAAGAG CTCAAGCTAG TGCCGGGCGC CAATGGCGAG CTCGGTGCCT CCGACCCCAA ACAGCTCCAG CGCATGCGCA CCAAGCTGGC CATGGTGTTC CAGCATTTCA ATCTGTGGGC CCACATGACG GTGTTGCAAA ACATCATCGA AGCGCCGGTC CATGTGATGG GAGTTCCCCG CGATCAGGCG GTGGAGATTG CGCGCAAATA CCTCAAGCGG GTCGATCTGG CCGGCATGGA AGACCGCTAC CCGGCGCACA TGAGCGGCGG CCAGCAGCAG CGCGTGGCGA TAGCTCGCGC GCTGGCGATG GAGCCCGAAG TGATGCTGTT TGACGAACCC ACCAGTGCGC TTGACCCCGA GCTGGTGTCC GAGGTGCTCA AGGTCATGAA GAACCTGGCG CTGGAGGGCC GCACCATGGT GGTGGTGACG CATGAAATGG GTTTTGCGCG CGACGTGTCC AACCATCTCA TCTTCTTGCA CAAAGGGCTG ATCGAGGAAG AAGGCAAGCC GGCGCAGGTG CTGGCCAACC CAAAAAGTGA GCGACTGGCG CAGTTTTTAT CCGGCAGCCT GAAGTAG
|
Protein sequence | MTTSTLKLQA ENIHKRFGSV EVLKGVSLTA HAGDVISIIG SSGSGKSTFL RCINLLEKPH QGRIVVAGEE LKLVPGANGE LGASDPKQLQ RMRTKLAMVF QHFNLWAHMT VLQNIIEAPV HVMGVPRDQA VEIARKYLKR VDLAGMEDRY PAHMSGGQQQ RVAIARALAM EPEVMLFDEP TSALDPELVS EVLKVMKNLA LEGRTMVVVT HEMGFARDVS NHLIFLHKGL IEEEGKPAQV LANPKSERLA QFLSGSLK
|
| |