| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1514 |
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| Symbol | |
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| ID | 3961129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1630281 |
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| End bp | 1631732 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916334 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_522778 |
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| Protein GI | 89900307 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0996868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGTG ATTTTGAAAT CGCGCGCAGA CGCTTCAGCC GATCCGCACT GGCGGCCTTC
GTGGTTCTGG GCCTGTCGGC TTGTGCCAAT ATGCAAGAGA TCGGGCCGCA AGCTGCGCTG
CGCGATGCCG CATCGCTGGG TCTGCCCATT CAATCCAGCG CCAGTGTCGC GCCCAACGCG
CAATGGTGGC GCGAGTTGGG TGACGAACAA CTGAACGGCT TGATTGACCA GGCCTTGGCA
GCCAACCCCA GCCTCAAAAT TGCGCAGGCC CGGCTCGCCC GCGCTCAAGC CGGTGCCGCT
GCAACAGAGG CCGCTAGTGG ACCGCAGCTC AGCGCAGGCG TTGACGCCAT GCGTCAAAAA
TTCACCGCCA ACGGCATGAT TCCGCCGCCT TTGGCCGGTT CAATGGCTGA AACCGGCACG
GCGCAACTCA GTGGCAACTG GGAGCTCGAT TTTTTTGGCA AGAACCGCGC TGCACTCGCA
GCTGCCCTGG GCAGCGCGCG CGCCGCGCAG GCGGATGCCG ATGCGGCCCG CACACTGCTG
GCCAGCACGG TGGCGCGCAA CTACTTTCAA TTGACACGGC TGCACGCTCA ATTGGCGCTG
GCGCAGCGCC TGCTGGCGCA ACGCACACAG GTGCTGCGGC TGGTGCAGCA CCGTCTGGAC
GCCGGGCTCG ACACGCAGCT TGAATTGCGC CTGAGCGAAG GCAATTTGCC CGATGCCCGA
CTGCAGATCG AAGGCCTGCA TGAGCAGATT ACGTTGACCA CGCACGCCTT GGCCGCGCTG
ATTGGACAGC CAAATAGGGC TCTAGCCATC GTCCCGCCTT TGCATGATGC TATAGAAATA
GCAGCACCTA CGACCGTGTC CGCCGACCTG TTGGGTCGCC GCGCTGACAT TGCTGCGGCC
CGCTGGCGCG TCGAGGCCGC CAGTCAGGAC GTCGCCGGTG CCAAGAGCCA GTTTTATCCC
AATGTCAATC TGGTCGCTTT TGCCGGTTTC TCCAGCATTG GGCTGGATCG CTTGCTCGGC
GCGGGCAGCG AGCAATGGGG CGTGGGCCCG GCACTGCGTT TGCCGCTCTT TGACGGGGGT
CGCTTGCGTG CCAATTTGCG CGGCAAAACG GCTGATCTGG ACGCCGCCAT CGAGAGCTAC
AACGCCGCCG TGATTGATGC CGTGCGCGAT GTGGCCGATC AACTCGCCGC CACGCAAGCC
ATCACACGTC AGCAGGCCGA GCAGCGCGCG GCGCAAGACT CAGCCGAACA CGCTTATGCC
ATCGCCACGC GGCGCTATGA GGCCGGACTG GGTAACTTGC TCAGTGTGCT GGCCGCCGAG
ACTGCCGTGT TGAGTCAAAG CCGCCAAGGC ATTGACTTGA GCGCTCGTGC ACGCGATACC
CAGGTTTCGC TGATGCGTGC GTTGGGCGGC GGTTATCGCG CCGAGCTGCC TGCCGCTACC
GCACAGAAAT AA
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| Protein sequence | MHRDFEIARR RFSRSALAAF VVLGLSACAN MQEIGPQAAL RDAASLGLPI QSSASVAPNA
QWWRELGDEQ LNGLIDQALA ANPSLKIAQA RLARAQAGAA ATEAASGPQL SAGVDAMRQK
FTANGMIPPP LAGSMAETGT AQLSGNWELD FFGKNRAALA AALGSARAAQ ADADAARTLL
ASTVARNYFQ LTRLHAQLAL AQRLLAQRTQ VLRLVQHRLD AGLDTQLELR LSEGNLPDAR
LQIEGLHEQI TLTTHALAAL IGQPNRALAI VPPLHDAIEI AAPTTVSADL LGRRADIAAA
RWRVEAASQD VAGAKSQFYP NVNLVAFAGF SSIGLDRLLG AGSEQWGVGP ALRLPLFDGG
RLRANLRGKT ADLDAAIESY NAAVIDAVRD VADQLAATQA ITRQQAEQRA AQDSAEHAYA
IATRRYEAGL GNLLSVLAAE TAVLSQSRQG IDLSARARDT QVSLMRALGG GYRAELPAAT
AQK
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