Gene Rfer_1497 details

Gene Information

• Locus tag: Rfer_1497
• ID: 3960939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 1609471
• End bp: 1609959
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637916317
• Product: NADH-quinone oxidoreductase, E subunit
• Protein accession: YP_522761
• Protein GI: 89900290
• COG category: [C] Energy production and conversion
• COG ID: [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
• TIGRFAM ID: [TIGR01958] NADH-quinone oxidoreductase, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.358345
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTCCG AAGAATCCAA AGTGCGCTTC GCTCAAGAAG TTGCCAAGTA CCCAGTGGAC 
CAGAAGCAGT CCGCCGTCAT GGCGTGCCTG GCGATTGTCC AGCAGGAGTC CGGTTATGTG 
AGCGCCGAGA GTGAAGTCCT GGTGGCTGAA TTTCTGGGTA TGGCTCCCAT GGCCGTGCAT 
GAAGTCACGA CGTTTTACAA CATGTACAAC CAGCAACCAG TTGGCAAGTA CAAGCTGAAT 
GTCTGCACCA ATTTGCCATG TCAGTTGCGC GACGGCGGAA AGGCACTCAA GCATCTTGAG 
CACAAGCTGG ACATCAAAAT GGGCGAGACC ACGCCTGACG GCATGTTCAC TTTGCAACAG 
TGTGAATGTC TTGGCGCTTG TGCTGATTCA CCTGTGTTGT TGGTGAACGA TCAGACCATG 
TGCAGTTTCA TGAGTGACGA CAAGTTGGAT CAACTGGTCG ATGGCCTGCG TGCGGTGGGG 
GATAAGTAA 

 

Protein sequence

MISEESKVRF AQEVAKYPVD QKQSAVMACL AIVQQESGYV SAESEVLVAE FLGMAPMAVH 
EVTTFYNMYN QQPVGKYKLN VCTNLPCQLR DGGKALKHLE HKLDIKMGET TPDGMFTLQQ 
CECLGACADS PVLLVNDQTM CSFMSDDKLD QLVDGLRAVG DK