| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1348 |
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| Symbol | |
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| ID | 3960576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1450771 |
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| End bp | 1451805 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916164 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_522613 |
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| Protein GI | 89900142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCG CCCGCACTAC CCTTTTCACC ACCCTGCGCC TGCTGACGCT CGCACTCGCC
TGTGCCACTT CAGTTGCCTA CGCAGACGAC TATGGTGATG TCAGCCAGTT GGTGCGTGCC
GGCAAGCTGG ACGAGGCCAT GGTCAAGGCC GACAGCTACC TGGTTGGCAA GCCGGCCGAC
CCGCAGATGC GCTTTCTCAA AGGTGTCATC CAACGCAATC TGGGCAAGCA GGCAGAGGCC
ATTGCCACCT TCACCAAGCT CACTGAAGAT TATCCCGAGC TGCCCGAGCC CTATAACAAC
CTGGCCGTGC TCTACGCGGG CCAAAGCCAG TTCGACAAAG CACGTGCCGC GCTTGAAATG
GCCATCCGCA CCAACCCCAG CTACGCCACG GCGCATGAAA ATTTGGGCGA CATTTACGCC
CGGCTTGCCA GTCAGGCCTA CAACAAGGCC TTGCAACTCG ATGGTGCCAA CGCAGCGGTG
CCGCCCAAGC TGGCCCTGAT TCGGGAGTTG TTCAGCCCCA ACAACAAGGG GCAGCATCCC
GCTACCACGG CGCTGGCCGC TGCCCCGGCA GTGCCTGTCG CCAAACCGTC AACGCCGGCG
CCTGCAGCTC CGACTGCCGT TCCAGCCGTC GTAGCTCCGG CCACAACCCT CAGAGCTGCA
CCAGCAAAAC CCGTCGCCAG CGACAGCGCA GCCCAAGAAT CCAGGCAAGT CGAAGAGGCC
GTGCAGGCCT GGGCCAAGGC CTGGTCGACC AAAGACATAA CGGCTTACCT GGGCGCTTAT
GGCAAAGAGT TTGATCCGGC CGGCCAGCAG AGTCGCAAAG CCTGGGAAGA AGAACGCCGC
AAGCGCATCG TCGGCAAGAC CAGCATCAGT GTCAAGCTGG AGAAACTGAG CGTCACAGTC
AATGGCGCCA AGGCGATCGC GAAATTCCGC CAGGACTACC GCGCGGGTGC GCTGGCGGTA
TCGAGCCGCA AAACGCTTGA ATTGGTCAAA ACCGGCAACC GATGGCTGAT CGTCAAGGAA
AGCACGGGAA ACTGA
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| Protein sequence | MTLARTTLFT TLRLLTLALA CATSVAYADD YGDVSQLVRA GKLDEAMVKA DSYLVGKPAD
PQMRFLKGVI QRNLGKQAEA IATFTKLTED YPELPEPYNN LAVLYAGQSQ FDKARAALEM
AIRTNPSYAT AHENLGDIYA RLASQAYNKA LQLDGANAAV PPKLALIREL FSPNNKGQHP
ATTALAAAPA VPVAKPSTPA PAAPTAVPAV VAPATTLRAA PAKPVASDSA AQESRQVEEA
VQAWAKAWST KDITAYLGAY GKEFDPAGQQ SRKAWEEERR KRIVGKTSIS VKLEKLSVTV
NGAKAIAKFR QDYRAGALAV SSRKTLELVK TGNRWLIVKE STGN
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