| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1308 |
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| Symbol | |
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| ID | 3961532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1400663 |
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| End bp | 1402135 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916123 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_522573 |
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| Protein GI | 89900102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATA AACTGAAAAT TACCGGTTGG ATTTCAATTG GTGTCATGGC GGGCGCCTTG
ACCACGGTGT CGCTGCAGAC CGTGGCGCGC GGCACGCTGA CACCTTTGCC GCTGGAGGAA
TTGCAGCAAT TGGCGGCCGT TTTTGGCATC GTCAAGAGCA ACTACGTGGA GCCGGTGGAC
GACAAAAAGC TGATTACCGA TGCCATCGCC GGTATGGTGG CAGGGCTGGA CCCGCATTCA
GTCTACCTCG ACAAAAAGGC GCTGAAGGAT TTCAACGAGG GCACAACGGG CAAATTTGTC
GGCGTCGGCA TCGAAATCTC GCAAGAAGAT GGCTTGATCA AGGTGGTGTC CCCGATTGAA
GGCTCACCCG CGTTTCGGGC TGGCATCAAA CCCAATGACC TGATCATCAA GATCAATGAC
ACCCTGGTCA AGGGTTTGAC CTTGAGCGAA GGCGTCAAGC GCATGCGCGG GGAACCCAAT
ACCAAAGTGC TGCTGACCAT TCTTCGCAAA TCCGAAAACA GAACCTTCCC GGTCCCGATC
GTGCGCGAAG AAATCCGCAC CCAGTCGGTG CGCAGCAAGG TGATCGAACC GGGTTACGCC
TGGATTCGCC TGAGCCAGTT CCAGGAACGC ACGGTGGAAG ACTTCGCGCG CAAGATGGAA
GAAATTTACA AGCAGGAGCC TCATCTCAAG GGCTTGGTGC TTGACTTGCG CAATGATCCG
GGCGGCTATC TGGACGCGGC CGTGGCCATT TCGGCGGCTT TTTTGCCGGC CAACGTGACG
GTGGTGTCGG CCAACGGCCA GTTGGCGGAA AGCAAATTCA CCTACAAGGC GGCGCCCGAG
TATTACCAGC GCCGTAGCGG CGGAGATCCG CTCAAGCACC TGACTGACGT GACCAAGGGC
GCGCTCAAAA GCGTACCCCT GGTGGTGTTG GTCAATGAAG GCTCCGCCTC AGCCAGTGAA
ATCGTCGCCG GGGCACTGCA AGATCACAAG CGCGCCAAGC TGATGGGCAA TCAGACTTTC
GGCAAGGGTT CGGTGCAAAC CGCAGTCTGC CTGGACTCTG GATTTCGCAT GGACAACTGC
CCGACGGCTG CCCTGAAGCT CACCACCAGC CGTTACTACA CGCCCAGCGG CAATTCGATT
CAGGCCAAGG GTATCGTGCC CGACGTCATG GTGGACGAAA CCGCCGAGGG CAATCTGTTT
GCCGCGCTGC GCACGCGCGA GGCGGATCTG GAGAAACACC TGAGCAACGG CCAGAGCGAC
GAAAAGAAAA GTAGCGTCAG CGATAAGGTT CGGGAAGATG CGCTTAAAAA GCTGGAGGAC
GAACTTAAAA AGCCCCTGGC CGAGCGCAAG CTGCCGGAGT ACGGCTCCGA CACGGATTTT
CAGCTGATTC AGGCCATCCA CCAACTCAAA GGTCAGACTG TCCTGGCCAG CAAGACCCTG
GTCGAGCGCC CGGAAGAAAA GAAGGAAGAG TGA
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| Protein sequence | MGHKLKITGW ISIGVMAGAL TTVSLQTVAR GTLTPLPLEE LQQLAAVFGI VKSNYVEPVD
DKKLITDAIA GMVAGLDPHS VYLDKKALKD FNEGTTGKFV GVGIEISQED GLIKVVSPIE
GSPAFRAGIK PNDLIIKIND TLVKGLTLSE GVKRMRGEPN TKVLLTILRK SENRTFPVPI
VREEIRTQSV RSKVIEPGYA WIRLSQFQER TVEDFARKME EIYKQEPHLK GLVLDLRNDP
GGYLDAAVAI SAAFLPANVT VVSANGQLAE SKFTYKAAPE YYQRRSGGDP LKHLTDVTKG
ALKSVPLVVL VNEGSASASE IVAGALQDHK RAKLMGNQTF GKGSVQTAVC LDSGFRMDNC
PTAALKLTTS RYYTPSGNSI QAKGIVPDVM VDETAEGNLF AALRTREADL EKHLSNGQSD
EKKSSVSDKV REDALKKLED ELKKPLAERK LPEYGSDTDF QLIQAIHQLK GQTVLASKTL
VERPEEKKEE
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