Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1295 |
Symbol | |
ID | 3962168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1389984 |
End bp | 1390325 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916110 |
Product | hypothetical protein |
Protein accession | YP_522560 |
Protein GI | 89900089 |
COG category | [S] Function unknown |
COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.30554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTT ATGCCTATAA ATGTGAGTCC TGCGGGTTTG CCAAGGACGT GCTGCAAAAG ATGTCGGATG CGGTGCTGAC CGATTGCCCC TCCTGCGGCG CTTCTGCCTT CAAGAAGCAA CTGACCGCGG CGGGCTTCCA GCTCAAAGGT TCTGGCTGGT ACGCCACCGA TTTCAAGGGC GGCGCCTCGG CTGCATCCAC TGCAACGGCT CCGGCCGCCG ACAGCGCCGG CGCTGTGGCA ACTGCGACAG AGGGCGCCAA GCCAAGCGAG AGTTCCACGA CAAAACCAGT TGCAACGCCG CCGGCAGCCG GTGGCTGCGG TGGCGCCTGC GCCTGCCATT AA
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Protein sequence | MPIYAYKCES CGFAKDVLQK MSDAVLTDCP SCGASAFKKQ LTAAGFQLKG SGWYATDFKG GASAASTATA PAADSAGAVA TATEGAKPSE SSTTKPVATP PAAGGCGGAC ACH
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