Gene Rfer_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1295 
Symbol 
ID3962168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1389984 
End bp1390325 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID637916110 
Producthypothetical protein 
Protein accessionYP_522560 
Protein GI89900089 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.30554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTT ATGCCTATAA ATGTGAGTCC TGCGGGTTTG CCAAGGACGT GCTGCAAAAG 
ATGTCGGATG CGGTGCTGAC CGATTGCCCC TCCTGCGGCG CTTCTGCCTT CAAGAAGCAA
CTGACCGCGG CGGGCTTCCA GCTCAAAGGT TCTGGCTGGT ACGCCACCGA TTTCAAGGGC
GGCGCCTCGG CTGCATCCAC TGCAACGGCT CCGGCCGCCG ACAGCGCCGG CGCTGTGGCA
ACTGCGACAG AGGGCGCCAA GCCAAGCGAG AGTTCCACGA CAAAACCAGT TGCAACGCCG
CCGGCAGCCG GTGGCTGCGG TGGCGCCTGC GCCTGCCATT AA
 
Protein sequence
MPIYAYKCES CGFAKDVLQK MSDAVLTDCP SCGASAFKKQ LTAAGFQLKG SGWYATDFKG 
GASAASTATA PAADSAGAVA TATEGAKPSE SSTTKPVATP PAAGGCGGAC ACH