| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1143 |
|---|
| Symbol | |
|---|
| ID | 3963449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1226642 |
|---|
| End bp | 1227025 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637915961 |
|---|
| Product | heavy metal transport/detoxification protein |
|---|
| Protein accession | YP_522412 |
|---|
| Protein GI | 89899941 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2608] Copper chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00252134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA GCGTTATTGA AGTTCACGAC ATGCTCTCGG TATTGAGCGT GGATGAAGTG
GAAGAACGCA TTGGCGCGGT TCCAGGTGTC GAGAGCGTTA CTGTGAATTT TGCTGCGAGG
AGCGCCACTG TGCGCTACGA CGAAACGCGA CTTGAGGTCG GCGACATCAA GTCGGCCGTG
CGCCAGCGTG GGTATGAGCC CGTCGTGCCG AGCGCCTCGG TGAGAGCCGA TTCCGCAACC
GCCGTACGAC AAGACAAAGC GGTGCCGTTG ACGGCACCGA CACCTGCCCC AGCCCCGTTG
GCCGCAACAC CCGAAGCCAC GCCTGGGCCC GCCGATCTTG CAGGCAACAA ACAAGAGGGC
CAGGCGGCTT CGGACAAGAT TTAG
|
|---|
| Protein sequence | MKTSVIEVHD MLSVLSVDEV EERIGAVPGV ESVTVNFAAR SATVRYDETR LEVGDIKSAV
RQRGYEPVVP SASVRADSAT AVRQDKAVPL TAPTPAPAPL AATPEATPGP ADLAGNKQEG
QAASDKI
|
|---|
| |