| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1128 |
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| Symbol | |
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| ID | 3963434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1212121 |
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| End bp | 1212765 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915949 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_522400 |
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| Protein GI | 89899929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.893823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTCG TCTTTGACTT TGGCGCTGTG CTGTTCACCT GGCGCCCGAC CGAGCTGCTG
CGTCGCCACT TTCCCCAGCG TGCGGCCTCG GAACCTCAGG CGGAGAATCT GGCGCAGGCG
GTGTTTGGTC ACGCCGACTG GCACCAGTTT GACCGTGGCG TCCTGTCGAT CGACACGGTG
GTCACACGCA CCGCCGCGCG GCTCGACCTG GACCCCGGCG CGTTGACGGG CTTGGTGGAA
AGCATCGCCG ACCATCTGGT GCCGATGCAG GGCTCGCTGG CTTTGCTGGC GCAGCTGCGC
GCTCTGCGTC AGCGGCAGGC CGATGCGCCC AAGCTCTACT TTTTGTCCAA CATGCCTGCA
CCTTACGCCC GCGCACTGGT GCAGCGTCAT GCCTTTTTGC AGTGGTTCGA TGGCGGTATC
TTCTCCAGCG ATGTGAGTCT GATCAAACCT GAACCGGAGG TTTATGCCTT GCTGGAGCGC
CGCTACGCCT TGGCGCCAGC CCGCACGATT TTTATTGATG ACCATGCGGC CAATGTGAAA
GCGGCGCAGG CGCGCGGCTG GCACGGCATC CAGTTTGAAT CGGCACCGCA GGTGCAGGCG
CAGTTGCTGC GTTATGGCTT GGCGCTACTG CTCCCTGACA GGTAG
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| Protein sequence | MNVVFDFGAV LFTWRPTELL RRHFPQRAAS EPQAENLAQA VFGHADWHQF DRGVLSIDTV
VTRTAARLDL DPGALTGLVE SIADHLVPMQ GSLALLAQLR ALRQRQADAP KLYFLSNMPA
PYARALVQRH AFLQWFDGGI FSSDVSLIKP EPEVYALLER RYALAPARTI FIDDHAANVK
AAQARGWHGI QFESAPQVQA QLLRYGLALL LPDR
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