Gene Rfer_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1068 
Symbol 
ID3963491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1141525 
End bp1142967 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content52% 
IMG OID637915889 
Producthypothetical protein 
Protein accessionYP_522340 
Protein GI89899869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAAT GCCTCACCCG ACTCTCGGAT ATTCAGAGAC CCAAACTCAT GCCAAATTAC 
GCGCAGTATC AGCAAGAGAT GACGGTCGAC ATCGCCAATA TTCTAAAGAC CGCGCAGTGT
CAACCAATCT TGTTCGTTGG CTCCGGATTC TCGCGTCGGT ACGCGAATGG CCCATCCTGG
GAAATACTGC TCACTGAACT CGCAGCGAAC TGCCCGTTCA TTGACAAGGA CTTTGCCTAC
TACAAGCAGA AGTACGATGG CGATCTTTGT AAGGTGGGTT CGGTGTTTGC CGAGCAGTAC
TTCGAGTGGG CTTGGTCTCC AGCCGGAAAG AAGAACTTCC CGCCACATTT GTTCGCGGCA
GGTGTCCCTC GTGACGCTTA CATTAAACAC GCCGCCGCCG ATAAGCTCGG TAGTCTTGCA
ATCTCTGACA CAGACGCATT GAACGCGGAA CTCAGCGCAC TCAAGGCAAT GGGACCTCAC
GCCATCATCA CTACCAACTA CGACACACTG CTTGAACAGA TATTCCCGAA ATACGAGGTC
GTGGTCGGCC AGAATGTGTT TCGGACATCG CCGCTAGTGA TTGGTGAGAT ATTCAAGATT
CACGGCTCGA TTTCCGACCC CGGATCGCTT GTGCTGACTC AAGATGACTA CTGCGTCTTC
GAGGAGGATA AGAAGTATCT CAGTGCCAAG CTGCTTACCT ATTTTGCTGA GCACCCACTA
TTATTCGTCG GCTATAGCGC CAGCGACGCC AATATTCGGA ACGTGCTGCA CGACATGAGC
CGGATGTTCA AGCCGAGCAC ATTGCTGATT CCCAACATTT ACATCCTGCA GTGGGACGAA
ATGCAGAACG ACCAAAGTTA CCCGCCGCGA GAGCATGTGC TGGAAGTCGG CCACGATGTC
AACGTGCGTA TCAAAAGCAT CACAGCAAAC TCGTATGAGT GGGTCTATAA GGCGTTTGGC
TCCGGCGGCG CAATGGAAAA GGTAGACCTG AAGGCGCTAA GGTCATTAAT GGCTCGAATG
GTGAACCTGA TTCGAACTGA CATTCCGACC AAGAATGTGC AGATCAACTA CGAGGCGTTG
GAGCAGGCCA TTTCTGACGG AGACAGCTTT GCGAACCTGT TTGGCGTTAC GAACTTGAAT
GACCCAGCCG CAGTGAATGC AAACCACCCA TATACCTCTT CAATGTTGGC AAAAAAGGTC
GGTCTCAAGC ACTGGACTGG CAGCAATCAG CTGATTAACC GGGTCGAAAA GGAAACTGGC
TTCGACATGA AGGCGAGCGA CAACGTTTTC CATGTCCGCA TAAAGAGCGG TGAAGCCGAA
GGGAGCGGGG TGCGAAAGTA TTCGGATGCC GCAGTAGCTC TCTTAAATAA AGTTAAAAAC
GGCGAGATCT ACACGTTGCC GACGCACTTA TTGTCGGGCG CTGCCAATGC GGAGGCGGTT
TGA
 
Protein sequence
MVKCLTRLSD IQRPKLMPNY AQYQQEMTVD IANILKTAQC QPILFVGSGF SRRYANGPSW 
EILLTELAAN CPFIDKDFAY YKQKYDGDLC KVGSVFAEQY FEWAWSPAGK KNFPPHLFAA
GVPRDAYIKH AAADKLGSLA ISDTDALNAE LSALKAMGPH AIITTNYDTL LEQIFPKYEV
VVGQNVFRTS PLVIGEIFKI HGSISDPGSL VLTQDDYCVF EEDKKYLSAK LLTYFAEHPL
LFVGYSASDA NIRNVLHDMS RMFKPSTLLI PNIYILQWDE MQNDQSYPPR EHVLEVGHDV
NVRIKSITAN SYEWVYKAFG SGGAMEKVDL KALRSLMARM VNLIRTDIPT KNVQINYEAL
EQAISDGDSF ANLFGVTNLN DPAAVNANHP YTSSMLAKKV GLKHWTGSNQ LINRVEKETG
FDMKASDNVF HVRIKSGEAE GSGVRKYSDA AVALLNKVKN GEIYTLPTHL LSGAANAEAV