Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0968 |
Symbol | |
ID | 3963606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1018771 |
End bp | 1019541 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637915792 |
Product | ABC transporter related |
Protein accession | YP_522243 |
Protein GI | 89899772 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.212738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGCA ACATTCTTGA AATTAGAAAT CTACATAAGC GATTCGGAGC AGTCGAGGTG CTGAAGGGCA TAGACTGCTC TATGAAACAG GGCGATGTGG TTTGTGTGAT TGGCTCCAGC GGATCAGGCA AGACCACAAT GTTACGCTGC ATAAATATGC TGGAAGATTT TGACGACGGT TCGATCCGTA TTGACAACCA GGATATCGGC TACGAGACCC GAGATGGTGT CCGCCGGCGT AAAAATGAAA AGGAAATTGC TAAGCAACGT GCACTTACCG GCATGGCTTT CCAGCAGTTC AATCTATTCC CGCACATGAC AGCGACCGAG AACATCATGC TGGGGCTCGT CAAGGTCAAG AACATGCGCA GGGATGAGGC GCATTCCATC GCTGAAAAAT GGCTTGATCG CGTTGGGCTG CTGGAGCGGC GCGATTACTA CCCCGGTCAA TTGTCTGGGG GGCAGCAGCA ACGCGTGGCA ATCGCCCGTG CCATCGCAAT GAGCCCGAAG CTGATGCTGT TTGACGAGGT AACATCCGCG CTCGATCCGG AACTGGTGAA TGAGGTTCTA CTAGTCATCA AGGATCTTGC ACGCGAAGGA ATGACCATGC TCCTTGTCAC CCATGAGATG CGTTTTGCCT TTGAGGTATC AACCCGCGTG ATCTTTATGA ATCAGGGCCG GATTGGTGAA GAGGGTGATC CCAGAGAAAT GTTTCTCAAG CCAAAAACTG AACGGCTAGC AGAGTTCCTG AAGAGCTCAA CATTCAACTA A
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Protein sequence | MDSNILEIRN LHKRFGAVEV LKGIDCSMKQ GDVVCVIGSS GSGKTTMLRC INMLEDFDDG SIRIDNQDIG YETRDGVRRR KNEKEIAKQR ALTGMAFQQF NLFPHMTATE NIMLGLVKVK NMRRDEAHSI AEKWLDRVGL LERRDYYPGQ LSGGQQQRVA IARAIAMSPK LMLFDEVTSA LDPELVNEVL LVIKDLAREG MTMLLVTHEM RFAFEVSTRV IFMNQGRIGE EGDPREMFLK PKTERLAEFL KSSTFN
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