Gene Rfer_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0968 
Symbol 
ID3963606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1018771 
End bp1019541 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID637915792 
ProductABC transporter related 
Protein accessionYP_522243 
Protein GI89899772 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.212738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA ACATTCTTGA AATTAGAAAT CTACATAAGC GATTCGGAGC AGTCGAGGTG 
CTGAAGGGCA TAGACTGCTC TATGAAACAG GGCGATGTGG TTTGTGTGAT TGGCTCCAGC
GGATCAGGCA AGACCACAAT GTTACGCTGC ATAAATATGC TGGAAGATTT TGACGACGGT
TCGATCCGTA TTGACAACCA GGATATCGGC TACGAGACCC GAGATGGTGT CCGCCGGCGT
AAAAATGAAA AGGAAATTGC TAAGCAACGT GCACTTACCG GCATGGCTTT CCAGCAGTTC
AATCTATTCC CGCACATGAC AGCGACCGAG AACATCATGC TGGGGCTCGT CAAGGTCAAG
AACATGCGCA GGGATGAGGC GCATTCCATC GCTGAAAAAT GGCTTGATCG CGTTGGGCTG
CTGGAGCGGC GCGATTACTA CCCCGGTCAA TTGTCTGGGG GGCAGCAGCA ACGCGTGGCA
ATCGCCCGTG CCATCGCAAT GAGCCCGAAG CTGATGCTGT TTGACGAGGT AACATCCGCG
CTCGATCCGG AACTGGTGAA TGAGGTTCTA CTAGTCATCA AGGATCTTGC ACGCGAAGGA
ATGACCATGC TCCTTGTCAC CCATGAGATG CGTTTTGCCT TTGAGGTATC AACCCGCGTG
ATCTTTATGA ATCAGGGCCG GATTGGTGAA GAGGGTGATC CCAGAGAAAT GTTTCTCAAG
CCAAAAACTG AACGGCTAGC AGAGTTCCTG AAGAGCTCAA CATTCAACTA A
 
Protein sequence
MDSNILEIRN LHKRFGAVEV LKGIDCSMKQ GDVVCVIGSS GSGKTTMLRC INMLEDFDDG 
SIRIDNQDIG YETRDGVRRR KNEKEIAKQR ALTGMAFQQF NLFPHMTATE NIMLGLVKVK
NMRRDEAHSI AEKWLDRVGL LERRDYYPGQ LSGGQQQRVA IARAIAMSPK LMLFDEVTSA
LDPELVNEVL LVIKDLAREG MTMLLVTHEM RFAFEVSTRV IFMNQGRIGE EGDPREMFLK
PKTERLAEFL KSSTFN