| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0929 |
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| Symbol | |
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| ID | 3963683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 978104 |
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| End bp | 979402 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915756 |
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| Product | D-serine deaminase |
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| Protein accession | YP_522207 |
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| Protein GI | 89899736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.560521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTT TGCAAGACAT TCTCGACCCG CAGATTGACC ACTCTTTCAA GGGCTTTCCG
CACACCAGCC CGCCCTTGCG CCGCTCGCAG ATTGCCGCTC AGAACTGGCG CGTGCTGGAC
GGTGATTTGC CGCTGCCACT GGCTCTCGTC AAGGAGCAGG CGCTGCAGCA CAACCTGTCG
TGGATGCAGC GCTTTGCTGC CGATCATGGC CTTGACATGG CCCCGCACGG CAAAACCACC
ATGTCGCCTC AGTTGCTCAA GCGACAGCTC GACGAGGGCG CCTGGGGCCT GACCTTTGCC
ACCGTGTCCC AGGTGCGCGC CGGGGTGTCA GTGGGTGCGC GCCGTTGCAT GATTGCCAAC
CAGGTGTTCG CCGCAGTGGA CCTGGCCGGC ATTCAGGACA TGCAGCGCAA GTACGACGGA
CTGCGAATTG CCTTCCTGGT GGATTCTGTG GCGCAGCTGG CGCTGATTGA AGCCTGGTAC
CTGTCGCCAA AAGTGCTCCA GTCGCCTGTG CGTCCTTTTG AGGTCTTACT GGAAATCGGG
GTCGAGGGCG GCCGTACCGG CTGTCGCAGC CAGAAAGATG CCATGACTCT GGCACGCCAC
CTCCATGACA GCCCGGCATG CCGCCTGGTC GGCATCGAGT GCTATGAAGG CCTGGGCGCG
ACCGGGCAAT CAGCGGCGGA CGAGGCGTAT GCCGCGGCGC TGATGCAGCG CGTGTGTGAA
ATTGCCGTCG CCTGTGATCA GCAGAATTTT TTTGACAACG AAGAGGTGTT GGTCAGCGCC
GGCGGCTCGG CGATTTTCGA CCTGGTGGCA AACCGACTCA AGCCCGAACT CTCCCGACCG
GTGCGCGGCA TCTTGCGATC AGGTTGCTAC GTGACGCACG ATCACGGGTT TTACAAGCGC
ATGGTCAATG CGGTCAATTC GCGCCTGCAC TGCAGCGGCG GCTTGCAGGC GGCGATGGAG
GTCTGGGCAT CTGTGCAGTC CTGCCCCGAG CCCGGTCTGG TGATACTCGC CGTGGGCAAG
CGCGACATTT CCTATGATCT GGATTTGCCC GTCCCGCTCA CTTTTTGCAA GCCCGGTGGC
GCGGCCATCA CGGATGCGCC GGCCGACTGG AAAATCAGCG GCCTGAACGA CCAGCATGCC
TATTTGCGTG GCACGGGTCC CGAGCATGCG GCGCTGCAGG TCGGCGATCT GGTGGCACTG
GGAATATCGC ACCCCTGCAC CACGTTTGAC AAATGGCGAT GGATGCCCGT GGTTGATGAA
AACTATGTGG TTTGCGATGC CCTTGTGACC CGTTTCTGA
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| Protein sequence | MTTLQDILDP QIDHSFKGFP HTSPPLRRSQ IAAQNWRVLD GDLPLPLALV KEQALQHNLS
WMQRFAADHG LDMAPHGKTT MSPQLLKRQL DEGAWGLTFA TVSQVRAGVS VGARRCMIAN
QVFAAVDLAG IQDMQRKYDG LRIAFLVDSV AQLALIEAWY LSPKVLQSPV RPFEVLLEIG
VEGGRTGCRS QKDAMTLARH LHDSPACRLV GIECYEGLGA TGQSAADEAY AAALMQRVCE
IAVACDQQNF FDNEEVLVSA GGSAIFDLVA NRLKPELSRP VRGILRSGCY VTHDHGFYKR
MVNAVNSRLH CSGGLQAAME VWASVQSCPE PGLVILAVGK RDISYDLDLP VPLTFCKPGG
AAITDAPADW KISGLNDQHA YLRGTGPEHA ALQVGDLVAL GISHPCTTFD KWRWMPVVDE
NYVVCDALVT RF
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