| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0888 |
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| Symbol | |
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| ID | 3963662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 927738 |
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| End bp | 928592 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915716 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_522167 |
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| Protein GI | 89899696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA GCAAGGCAAC CCCCTGGTGG CTTTCCGGGC CGGCACTGGT GCTTTTTACA
GCACTGCTGT TGGTGCCGCT GCTGCTCACC ACCGTACTGT CCTTCAACGC CTATGACCCG
GCAACCGGCG TGAAAGCCGG AGAGTTCACG CTGGAACACT ACGCTCATGT GTTCACCGAC
GACTATTACT ACGGCATTTT CTGGCGCACC TTCTGGATCT CTGGCCTGGT CACGCTGATT
TGCGTTGCCG TGGGTGCACC CGAGGCCTAC ATCCTGAGTC GCATGGGCAA GCCGTGGCGT
TCAATTCTGC TGCTGGTGGT GCTGGCACCG CTACTGGTGT CGGTGGTGGT ACGGGCCTTT
GGCTGGAGCA TGCTGCTGGG GCCGGAGGGC CTGGTCAACA GCGGCCTCAA GCTGGTCGGT
CTAGGGCCGG TGCGCATGCT TTACACCGAG GTCGCCGTGG TGGTGGCACT GGTGCATGTG
ATGCTGCCCT TCATGGTGAT TCCGGTCTGG ACCTCGCTGC AAAAGCTCGA CCCGGGCGTC
GAAAACGCAG CGCTGTCGCT GCGCGCCTCA CCGTTCACCA CCTTGCGGCG CATTGTCTTG
CCACAAGTGC TGCCCGGCAT CTTGTCGGGC AGCCTGATCG TGTTTGGCCT GTCGGCCAGC
GCGTTTGCCA TCCCTGGCCT GCTTGGCGGG CGGCGCTTGA AGATGGTCGC CACCGTGGTC
TATGACGAGT ACCTGCATGA GCTCAACTGG CCACTGGGTG CGGCCATTGC GCTCACGCTG
CTGGTGGCCA ACCTGGTGGT CATGCTGAGC TACAACCGGC TTGTTGAAGG CCGCTACAAG
AAGTCATTGG GGTAA
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| Protein sequence | MSASKATPWW LSGPALVLFT ALLLVPLLLT TVLSFNAYDP ATGVKAGEFT LEHYAHVFTD
DYYYGIFWRT FWISGLVTLI CVAVGAPEAY ILSRMGKPWR SILLLVVLAP LLVSVVVRAF
GWSMLLGPEG LVNSGLKLVG LGPVRMLYTE VAVVVALVHV MLPFMVIPVW TSLQKLDPGV
ENAALSLRAS PFTTLRRIVL PQVLPGILSG SLIVFGLSAS AFAIPGLLGG RRLKMVATVV
YDEYLHELNW PLGAAIALTL LVANLVVMLS YNRLVEGRYK KSLG
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