| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0860 |
|---|
| Symbol | |
|---|
| ID | 3963771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 897660 |
|---|
| End bp | 898607 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915688 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_522139 |
|---|
| Protein GI | 89899668 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.134812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCGC ACGCTGCGGC CATGATAGAG GTGAGCGCCC TGGAGAAGCA TTTCGGGGCC
TTGAAGGCCG TGGCTGATTT GAGCTTTGCG GTGCAGGCGG GCGAGATCTT TGGTCTGGTG
GGTCCCGACG GTGCGGGCAA GACCACGACG CTGCGCATGC TCGCTGGCGT GATGCAGCCC
GATGCGGGCA GCATCGTGAT CGACGGCATC GACGTGCGGG CGTTGCCCGA GCAGGCCAAA
CGCCATGTGA GCTATATGCC GCAGCGCTTT GGCCTGTACG AGGACCTGAC GGTGGACGAG
AACATCCGTT TTTACGCCGA CCTGTTCGAG ATGCCGAGCC AGGTTTGGCG CGCACGCGCC
GACACCATGC TCGCCGCCGC CGACATGACG CCGTTTCGGC AACGGCTGGC GGGCCAACTC
TCAGGCGGCA TGAAACAAAA ACTCGGGCTC GTCTGCTCGC TCGTGCATAC GCCCAGGGTG
TTGCTGCTCG ACGAGCCGAC CACCGGCGTG GATCCGGTCT CGCGGCGCGA GTTCTGGCAG
ATCCTCTACT CAATGCGCGC CGAGGGCGTG GCAATGCTGA TTTCCACCGC CTATCTGGAC
GAAGCCGAGC GCTGCGACCG GCTTGCCCTG CTTCATGCGG GCGCCATGAT GTATTGCGAT
ACGCCAGCGG GGTTGAAGGC GCGCATGCCC GGGGCCATGC TCGAAATCAG CGCGACTGAT
CCGCGCCAGC TGCTCGACTT TGTGCGCACG TTGCCGGGGG TGCAGGGCGT GTTGCTGGTG
GGCATCGGCG TGCACATCCA TGTCGATAGC CGAGAGCGTT TGGCGCAGAT TGAGGCGGCG
CTGGCCGCCA AAGGCATGGC CGTGACCGGC ATCGCCCTGG TGGAGCCGAC GATCGAGGAT
CTCTTCGTGG CGCTGCTGGA GCAGACGGGT TCGAGGGAGC CGGCCTGA
|
|---|
| Protein sequence | MGAHAAAMIE VSALEKHFGA LKAVADLSFA VQAGEIFGLV GPDGAGKTTT LRMLAGVMQP
DAGSIVIDGI DVRALPEQAK RHVSYMPQRF GLYEDLTVDE NIRFYADLFE MPSQVWRARA
DTMLAAADMT PFRQRLAGQL SGGMKQKLGL VCSLVHTPRV LLLDEPTTGV DPVSRREFWQ
ILYSMRAEGV AMLISTAYLD EAERCDRLAL LHAGAMMYCD TPAGLKARMP GAMLEISATD
PRQLLDFVRT LPGVQGVLLV GIGVHIHVDS RERLAQIEAA LAAKGMAVTG IALVEPTIED
LFVALLEQTG SREPA
|
|---|
| |