Gene Rfer_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0555 
Symbol 
ID3960743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp579659 
End bp580843 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID637915385 
Productflagellar hook-length control protein 
Protein accessionYP_521837 
Protein GI89899366 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTG AATCAAGCAG CACGGCCAGC AGTCCCAAAA TACTGGGGGC AGTAGAAAGC 
AGCAGCGCCA AGGACAAAGG CAAAGTGAAG TCAGGGGAGA AACCTGATGA TGTTCCGGGT
GGTTTTCTGG CGCTGATAAC GGCTCTCGAT TCGGATACCG ATGTGAGCGC GGAGGTGAGC
GTGGCGACGA CAGCCCCGGA TGCCGATCCT GCCCTGTTAT TGGCGCAAGC TGGTGCAACT
GGTGCCGTTC GTGCCGTTGG TGCCGGTGGT GCAACTGGTA CCGTTGGTGT TGGTGCGGTA
GGAGCGAAGG CGGGTGTTGC CAATGAACCG CTTGCACAAA CAACGTTACC AACGAGTGGG
CGGGCTTCAT CCGCAGCCTC TCTTTTGAAC CTGGAGCCAG GCAACCCCAA GCAGGCAGTT
GATGCGATGC TGGAGCAGGC GGCGCAGACC TCGCCCGCCT GGTCCACCAA GGGCAAGGGT
GCCGGGTTTC AGTCGGCTGT CAGCGCCACC GTAGCGGACG CGCGGGCAGT GCAGCAGGCC
GGGCGCGCGG ACTCGGCTGC GAGCGAGCCC GCGTTGTCGG GGACGCTGCT GAGCGGCGAG
GGTGCACTGC TCAGCAGCGA AATAGGTGAC GCCTTGCTCA AGCCAGTGCA GCGCTCTGCC
AACAAGTTTT CGGGGCTGTC GGCCAACGCT GGCATGGAGG GGGCATGGGG GCATCAAGCC
CTGCTGGCGG GAAACCGTGT CAATACGTCT GTTGCGCTGG CCAGTCCGTC GATGCAGTCG
CTTGGGCCGG CGGTGGCAGA TACGGTGAGC TATTGGGTGA CGCAAGGGGT TCAAAACGCC
GAGTTGAAGC TTGATGGCTT GGGTGGTGAA AGCGTTGAGG TGAAAATATC GCTCAAGGGC
GATCAGGCGC ACATTGGTTT TCGCACGGAC CAGCCCGAGA TTCGTCAGAT GCTCGAAGGG
GCGCTTGCCC ACCTGAGGGA CGCCTTGAAG AGCGAAGGTC TGGTGCTGTC TGGGGTTTCG
GTAGGCGCAT CCGGCCAGGA TGGCTCGGGA GCGCAGGAGC AGCGCAATCC CCCCGGCATC
CGTCAAGCCG GCCAGGCCAA CCTGATAACG ACGGAGCAGC TACCGACGCC AGGCCAGCAG
CGAGTTAATC TGACGGTGGG TCGGGCGCTG GATCTTTTTG TGTGA
 
Protein sequence
MSVESSSTAS SPKILGAVES SSAKDKGKVK SGEKPDDVPG GFLALITALD SDTDVSAEVS 
VATTAPDADP ALLLAQAGAT GAVRAVGAGG ATGTVGVGAV GAKAGVANEP LAQTTLPTSG
RASSAASLLN LEPGNPKQAV DAMLEQAAQT SPAWSTKGKG AGFQSAVSAT VADARAVQQA
GRADSAASEP ALSGTLLSGE GALLSSEIGD ALLKPVQRSA NKFSGLSANA GMEGAWGHQA
LLAGNRVNTS VALASPSMQS LGPAVADTVS YWVTQGVQNA ELKLDGLGGE SVEVKISLKG
DQAHIGFRTD QPEIRQMLEG ALAHLRDALK SEGLVLSGVS VGASGQDGSG AQEQRNPPGI
RQAGQANLIT TEQLPTPGQQ RVNLTVGRAL DLFV