| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0334 |
|---|
| Symbol | |
|---|
| ID | 3961373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 332553 |
|---|
| End bp | 333386 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637915166 |
|---|
| Product | alpha/beta hydrolase |
|---|
| Protein accession | YP_521619 |
|---|
| Protein GI | 89899148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCG CACCCTTGAA ACTTCATCAA TTTGGCTCCA CCCACGGCAA ACTGGTCATC
TATTTTCACG GTGCCCCCGG TGCCCCGGAA GAAGGGCAGC TCTTCGACCT GGAAGCAAAA
AAGCACGGCT TGACGGTGCT TTGCCTTGAC CGGTTTGCCA TCCATCCTTC TATCACCGGA
GAGGCGTATT ACCGGCTTCT GGCCGAAGAA ATTGCAAAAG AAGCTGGCGG TCAAGCCGTC
GATTTCATTG GATTTTCCAT CGGTGCGTTC ATCGCCCTTC AGACTTGCCG GTACATGCCC
AACGGGGTCA CAAGTCTGCA CTTGGTGTCT GCGGCAGCGC CTTTGGAGGC GGGGGAGTTT
CTGCCAGCCA TGGCGGGCCA ACAGGTGTTT CAACTGGCCA AGGCTGCGCC TGTGCTGTTT
CTGCTGTTGT CTTACTGGCA AAGTTTGCTC GCCTGGCTGG CCCCCAAAGC CTTGTTTCGC
TTGCTGTTTG CCAGTGCCGA AGGTGCTGAC AAGGCCCTGG CCGCCGACCC TGAGTTTCAG
GCCCGCATCA CCGCCATATT GCGCTCATGC TTTCTGGGCC GCGTGCGGGG CTATGCAAGA
GACGTTGGGG CGTATGTGCA GCCGTGGAGC GCCACACTGG CCGACATTGC TGTGCCCACT
CACCTCTGGC ATGGTGATGC GGACAACTGG TCGCCGCCGC AGATGGCGCA CTACCTGGCA
TCGGCAATTC CGGGCGCTGC CTCAGCCCAA AGCTTCAGCG GGCTGTCGCA CTACTCGTGC
TTGTACCGGG CGGTGCCAGA AATATGCCGG GTGTTGGGCC GGGCCTACAC ATAG
|
|---|
| Protein sequence | MEVAPLKLHQ FGSTHGKLVI YFHGAPGAPE EGQLFDLEAK KHGLTVLCLD RFAIHPSITG
EAYYRLLAEE IAKEAGGQAV DFIGFSIGAF IALQTCRYMP NGVTSLHLVS AAAPLEAGEF
LPAMAGQQVF QLAKAAPVLF LLLSYWQSLL AWLAPKALFR LLFASAEGAD KALAADPEFQ
ARITAILRSC FLGRVRGYAR DVGAYVQPWS ATLADIAVPT HLWHGDADNW SPPQMAHYLA
SAIPGAASAQ SFSGLSHYSC LYRAVPEICR VLGRAYT
|
|---|
| |