| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0327 |
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| Symbol | |
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| ID | 3961288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 326141 |
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| End bp | 327445 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915159 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_521612 |
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| Protein GI | 89899141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACAA CTCCCTATTT TTTCGCACCC GCTGGCCACG GGCTGGTTCC GGCTTTGCTG
GCCATCCTGG CGCTTGCGGG TTGCGCCTCC ACACCATCGG TCGAGCCCGG GGCAGCGGCA
CCATCGACGA CCTCTGCTAA CCCTACACCA GCCGGTGCGA CACCTGCCAC ACTCGACGCG
GTTGAAAACA GCCAGAAGTT TGCCCGTTGG GTGGCCGAAT TCAGCGCCAC CGCGCGCACG
GCTGGCATTG ACGAGGCCAC GCTGCATATC GCGTTCGACA ACGCCCGCTT CCTGCCACGC
GTCATCGAGT CGGACCGTGC GCAGCCCGAG TTCACCCGCA CACCGTGGGA CTACCTCGAT
ACCGCCGTGT CGGCGCTGCG CGTCACCCGT GGGCAAGACA AGCTGCTGCA ACTGCGGCAG
CAAATCGACC CTATCGCCGT GCGCTACGGC GTGCCGACCG AGGTGCTGCT CGCGATCTGG
GGCATGGAGA GCAGCTACGG CAGTTTTGTG GGCGACCTAC CCACCATCGA CGCCCTGGCG
ACGCTGGGCT TTGAAGGCCG ACGCGAGGCA TGGGCGCGCA ACCAATTGCT GGTTGCTTTG
AAGATCTTGC AGAGCCACGA CATAGTCCGC GTGCAGATGG TGGGCTCATG GGCGGGTGCC
ATGGGCCAGA CGCAATTCCT GCCCTCGGTC TTCCTGGCCT ACGCGGTCGA TGCCGATGGC
GATGGCCGAC GCGACATCTG GGGCAGCGTG CCCGATGTGA TGGCATCCAC CGCCAACTTT
TTGGTCGGCT CCGGTTGGCA GGCCGGTCAG CCCTGGGGGG CCGAGGTGCG CTTGCCGCCG
GGATTCGACT ACGCGCGCAC CGATGCCGAT GTGCGCCAGC CCACCGCCGC ATGGGTAGGC
GCGGGCGTGC AGGCCATGGA CGGCACAGTG CTGCCAAGCT TTGCCGACGG CTCCATCCTG
CTTCCGGCTG GCGCGCGCGG GCCAGCCTTT CTGGTCGGCA GCAACTTCCG CACCATCCTG
CGCTACAACA ACTCCACCAG TTACGCGCTC GGTGTCCACC TGCTGGCGCA GCGGCTGGCC
GGTGGCCCCG CGATCCAGGC CGCCTGGCCG CGCGACCTGC ACGCCCTGAC GAGTGACCAG
ATGCTGGCGC TGCAAACGGC GCTGAATGCG CGCGGCTTCG ACAGCGGTAC GCCCAACGGC
AAGATGGGCC CGGCCACGCA GCGCGGCATT CGCCGCTACC AGCGCAGCCT GGACCTGCCG
ACGGATGGTT ATCCGACGCT GGACTTGCTG CAGCGTCTGC AGTGA
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| Protein sequence | MATTPYFFAP AGHGLVPALL AILALAGCAS TPSVEPGAAA PSTTSANPTP AGATPATLDA
VENSQKFARW VAEFSATART AGIDEATLHI AFDNARFLPR VIESDRAQPE FTRTPWDYLD
TAVSALRVTR GQDKLLQLRQ QIDPIAVRYG VPTEVLLAIW GMESSYGSFV GDLPTIDALA
TLGFEGRREA WARNQLLVAL KILQSHDIVR VQMVGSWAGA MGQTQFLPSV FLAYAVDADG
DGRRDIWGSV PDVMASTANF LVGSGWQAGQ PWGAEVRLPP GFDYARTDAD VRQPTAAWVG
AGVQAMDGTV LPSFADGSIL LPAGARGPAF LVGSNFRTIL RYNNSTSYAL GVHLLAQRLA
GGPAIQAAWP RDLHALTSDQ MLALQTALNA RGFDSGTPNG KMGPATQRGI RRYQRSLDLP
TDGYPTLDLL QRLQ
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