| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0187 |
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| Symbol | |
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| ID | 3961341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 185215 |
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| End bp | 186105 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637915022 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_521476 |
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| Protein GI | 89899005 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAG CCCTTGATCC CCGCCAGCGC GCCATGTTGC AGGAGATGGG GGTGCGCGTC
TGGCTGCCTG CGGCTGCGGC TGATCTGGCG GCGCCGGCGC TGCCAGCCGC CGTGCAGGCA
GCGCCGGAAG CGCCCAGCAA CGCTATTGAA AACGTAGCTA CCAACATAAC AACGACGGGG
GCTACAGCTC AAAAAATCTT AAAGACTTCA GCACCGCCCG AAACCAGGGG AACGGCTACC
GGCTCGGGCG TACCCGCCAC TGATGTGGCC GGCCTGGACT GGCCCGCGCT GACGCAGGCC
ATCGCCACGT GCCAGGCGTG CCCCCTGTGC ATTGGGCGCC GCACCGCCGT GCAAGCGGCG
CCCGATGCAC CGCGCCTGGC CGATTGGCTG CTGGTGGGCG AGCCGCCCGA TGACGCCGAC
GAGCAGGCGG GAGCGCCTTT TGCCGGAGCC GCAGGCCAAT TGCTCGACAA CATGCTCAAG
GCGCTGGGCC TGAGCCGCCA CGCCGGCAGT GGCGTTGCCG CCCCGGCGGC TCAAGCGACG
ACAGCGGCTT ACGTCACCCC GATCGTCAAG TGCCGCCCGG CGCAGACGCG CAACCCGACC
CAGGCCGAAC TCGCCAGCTG CGAAAACTAC CTGCGCCGCG AAGTGGCCCT GGTGCAGCCC
AAGGTCATCC TGGCCTTGGG CCGGTTTGCC GCGCAGGGCT TGTTGCAGGG CAGTCTGCCC
GGTTTGGCCG GCACGCCGCT GGGCCAACTG CGTGGGCAAA TCTACCGCTA CCAGGGTATT
CCCGTCATCG TCAGTTATCC GCCGAGTTAT CTGCTGCGCA GCCCGCAGCA CAAAGCCCGC
GCCTGGGTTG ATTTGTGCCA GGCGCAGGAG GCCCTGCGGC GCGGCGGCTA A
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| Protein sequence | MSLALDPRQR AMLQEMGVRV WLPAAAADLA APALPAAVQA APEAPSNAIE NVATNITTTG
ATAQKILKTS APPETRGTAT GSGVPATDVA GLDWPALTQA IATCQACPLC IGRRTAVQAA
PDAPRLADWL LVGEPPDDAD EQAGAPFAGA AGQLLDNMLK ALGLSRHAGS GVAAPAAQAT
TAAYVTPIVK CRPAQTRNPT QAELASCENY LRREVALVQP KVILALGRFA AQGLLQGSLP
GLAGTPLGQL RGQIYRYQGI PVIVSYPPSY LLRSPQHKAR AWVDLCQAQE ALRRGG
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