Gene Rfer_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0178 
Symbol 
ID3961332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp177911 
End bp178387 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content50% 
IMG OID637915013 
ProductMarR family transcriptional regulator 
Protein accessionYP_521467 
Protein GI89898996 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGC CAACAAACGT CAAATTCACA ACCAAGAATT CAAGTGAAAG TCTTGAATTT 
TGCTTGCGAC TGACACGCGC CTATGCGACT CTGACACGCC GACTGGACAA TGCGCTTTCC
AACTTGCATG GACTGAGCTT TAGCGATTTC ATGATTTTGT ATTACCTCGA CCGCGCACCG
GATTCCAGAC TGCGGCGAAT TGACTTGGCG GAGCGTTTAG GTGTTACGGC GTCGGGTGTT
ACGCGAAGTC TATTGCCCAT GGAAAAACTG GGGTTGGTAT CACGACAACC TGACCCCAGA
GATGCCAGGG TTGGTTATGC GTCATTGACG GATGCTGGTC AGCAACTTCT GAAATATGCG
CTGGCGTCCA TTGAACCAAT CGCCAAAGAA GCAATTCAGA AGGTGCCTGC GGAGCAAATT
GGCCCGTTCT TGTTGGTGCT GGGTGAGCTT GCTGGCATCA ATCTCTCGAA CAATTAG
 
Protein sequence
MGKPTNVKFT TKNSSESLEF CLRLTRAYAT LTRRLDNALS NLHGLSFSDF MILYYLDRAP 
DSRLRRIDLA ERLGVTASGV TRSLLPMEKL GLVSRQPDPR DARVGYASLT DAGQQLLKYA
LASIEPIAKE AIQKVPAEQI GPFLLVLGEL AGINLSNN