Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0164 |
Symbol | |
ID | 3960166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 163336 |
End bp | 164094 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637915000 |
Product | ABC transporter related |
Protein accession | YP_521454 |
Protein GI | 89898983 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.437005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAT CACCGAATTC CCCGTTTGCG CTGGTTGACA TTCGTGGCCT GCACAAGAGT TTTGGCGCCA CCGAAGTGCT CAAGGGCATT GACCTGCAGG TGGGCCGCAA GGAAGTGGTC AGCATCATCG GCAAGAGCGG CTCGGGCAAG AGCACGCTAT TGCGTTGTAT CAACGGCCTG GAGACCTTTG AGCGTGGCAC GCTGACCGTG GACGGCCAGG CCTTGCAACA CGGCGATGCC AACGCCATGC GCGAGCTGCG CCAGCAGGTG GGCATGATTT TTCAGAGCTT CAACCTGTTC CCGCACCTGA GCGCCGGGCG CAACGTGATG CTGGCCCCGA CCCTGGTCAA GGACTTGCCC AAGGAGGAGG CCAAAGCCCG CGCCCAAGCG CTGCTGGAGC GCGTGGGATT GGGCAGCCTG TTTGACCGCA TGCCCGATCA ACTCTCGGGC GGGCAGCAGC AGCGCGTGGC CATTGCCCGT GCGCTGGCCA TGGCACCCAC CGTGCTGCTG TGCGATGAAA TTACGTCGGC GCTGGATCCG GAACTGGTGG GCGAAGTGCT GCAGGTGGTG GAGATGCTGG CCGTTGATGG CATGACCCTG ATTCTGGTCA CCCATGAGAT GGCCTTTGCC CGCAAGGTCA GCGACCGCGT GGTGTTCATG CACCAGGGGC TGATCCACGA AGCGGGCACG CCGGACGAGA TTTTTAACCG GCCGCAGACA CCCGAGCTGC GGCAGTTTCT GTCGGCTTTA CGCGACTGA
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Protein sequence | MTTSPNSPFA LVDIRGLHKS FGATEVLKGI DLQVGRKEVV SIIGKSGSGK STLLRCINGL ETFERGTLTV DGQALQHGDA NAMRELRQQV GMIFQSFNLF PHLSAGRNVM LAPTLVKDLP KEEAKARAQA LLERVGLGSL FDRMPDQLSG GQQQRVAIAR ALAMAPTVLL CDEITSALDP ELVGEVLQVV EMLAVDGMTL ILVTHEMAFA RKVSDRVVFM HQGLIHEAGT PDEIFNRPQT PELRQFLSAL RD
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