Gene Rfer_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0164 
Symbol 
ID3960166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp163336 
End bp164094 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637915000 
ProductABC transporter related 
Protein accessionYP_521454 
Protein GI89898983 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.437005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAT CACCGAATTC CCCGTTTGCG CTGGTTGACA TTCGTGGCCT GCACAAGAGT 
TTTGGCGCCA CCGAAGTGCT CAAGGGCATT GACCTGCAGG TGGGCCGCAA GGAAGTGGTC
AGCATCATCG GCAAGAGCGG CTCGGGCAAG AGCACGCTAT TGCGTTGTAT CAACGGCCTG
GAGACCTTTG AGCGTGGCAC GCTGACCGTG GACGGCCAGG CCTTGCAACA CGGCGATGCC
AACGCCATGC GCGAGCTGCG CCAGCAGGTG GGCATGATTT TTCAGAGCTT CAACCTGTTC
CCGCACCTGA GCGCCGGGCG CAACGTGATG CTGGCCCCGA CCCTGGTCAA GGACTTGCCC
AAGGAGGAGG CCAAAGCCCG CGCCCAAGCG CTGCTGGAGC GCGTGGGATT GGGCAGCCTG
TTTGACCGCA TGCCCGATCA ACTCTCGGGC GGGCAGCAGC AGCGCGTGGC CATTGCCCGT
GCGCTGGCCA TGGCACCCAC CGTGCTGCTG TGCGATGAAA TTACGTCGGC GCTGGATCCG
GAACTGGTGG GCGAAGTGCT GCAGGTGGTG GAGATGCTGG CCGTTGATGG CATGACCCTG
ATTCTGGTCA CCCATGAGAT GGCCTTTGCC CGCAAGGTCA GCGACCGCGT GGTGTTCATG
CACCAGGGGC TGATCCACGA AGCGGGCACG CCGGACGAGA TTTTTAACCG GCCGCAGACA
CCCGAGCTGC GGCAGTTTCT GTCGGCTTTA CGCGACTGA
 
Protein sequence
MTTSPNSPFA LVDIRGLHKS FGATEVLKGI DLQVGRKEVV SIIGKSGSGK STLLRCINGL 
ETFERGTLTV DGQALQHGDA NAMRELRQQV GMIFQSFNLF PHLSAGRNVM LAPTLVKDLP
KEEAKARAQA LLERVGLGSL FDRMPDQLSG GQQQRVAIAR ALAMAPTVLL CDEITSALDP
ELVGEVLQVV EMLAVDGMTL ILVTHEMAFA RKVSDRVVFM HQGLIHEAGT PDEIFNRPQT
PELRQFLSAL RD