Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0159 |
Symbol | |
ID | 3960161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 158865 |
End bp | 160097 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637914995 |
Product | diaminopropionate ammonia-lyase |
Protein accession | YP_521449 |
Protein GI | 89898978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACAAC TTGCAAAACA CCCGTTCACT CTGCTGCCCA ATGCTCGCTT CCAGCAAGCC GAGCCCTATG GCGCACATCG CAGCACCCTA CTCAGCGCAA GCGCCCTGGC GCAAGCGCAG ACCGTCATCA CTTCATGGCC GGGTTACACC GTGACCCGCC TGTGCTCGCT GCCTGTGCTT GCCCGCACGG CAGGCGTGGC CAGCATCCAC TACAAGGACG AAGCTACCCG CTTTGGCCTG GGCAGCTTCA AAGGGCTGGG CGGGGCCTAT GCCGTGGCGC GCCTGCTGTG CCGTGAGCTG GGCCAGCGCC TGGGCCGCCC GGTGAGCCAT GCCGATCTGC AGAGTGACCC CGCGCTGCGC CAGGCCTGCG GCGACATCAC CGTCACCTGC GCCACCGACG GCAACCATGG CCGCTCGGTG GCCTGGGGCG CGCAGATGCT GGGCTGCCGC TGCGTCATCT ACATCCACGC CACCGTGAGC GAGGGGCGCA AGGACGCGAT TGCCCGCTAC GGCGCGCAGG TGGTGCGCAC CGCGGGCAAT TACGACGACT CGGTGCAGCA GGCCGACCGC GACGCAAAAA CCAATGGCTG GTTTGTGATC TCTGACACCT CCTACCCCGG TTACATGGAC ATTCCCCGCG ACGTGATGCA GGGCTACCAG TTGATGGTGC ACGAGGCGGT GAGCGCCCTG CCGCAGTGGC CTACGCACGT GTTTGTGCAA GCCGGCGTCG GCGGTTTTGC GGCGGCGGTC TGCGCCTATT TCTGGGAACG CAGCGCCGAG CAGCGCCCGG TGTTCGTGGT GGTGGAGCCC GAGCGGGCCG ACTGCCTGCT ACAAAGCGCG CGCGCCGGTG CCGTGGTCGC TGTCAAGGGC GACCTGGACA CACTGATGGC CGGCCTGGCC TGCGGCGAAG TCTCGCTGCT GGCTTGGGAC ATTCTGGCCA CCGGTGCCAA CGCCTTTTGC ACCATCCCCG ATGCCGCCGC CGTGGACACC ATGCGCCTGC TGGCCAGCCC GCAGGGCGGT GACCCGGTCA TCGTCGCCGG TGAGTCCGCC GTGGCGGGCC TGGCCGCGGC CCTGCTCGCC GCGCACGACA GCACTGCCCG CGCGTCACTC GGCCTGGGGG TAGAGAGCCG CGTGCTGCTG TTTGGCAGCG AGGGCGATAC CGACCCCGCC CTGTACCAGC AACTGGTGGG CCGCAGTGCA GCCCAGGTGC TGCAGGATGG GGCCTCTGTA TGA
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Protein sequence | MPQLAKHPFT LLPNARFQQA EPYGAHRSTL LSASALAQAQ TVITSWPGYT VTRLCSLPVL ARTAGVASIH YKDEATRFGL GSFKGLGGAY AVARLLCREL GQRLGRPVSH ADLQSDPALR QACGDITVTC ATDGNHGRSV AWGAQMLGCR CVIYIHATVS EGRKDAIARY GAQVVRTAGN YDDSVQQADR DAKTNGWFVI SDTSYPGYMD IPRDVMQGYQ LMVHEAVSAL PQWPTHVFVQ AGVGGFAAAV CAYFWERSAE QRPVFVVVEP ERADCLLQSA RAGAVVAVKG DLDTLMAGLA CGEVSLLAWD ILATGANAFC TIPDAAAVDT MRLLASPQGG DPVIVAGESA VAGLAAALLA AHDSTARASL GLGVESRVLL FGSEGDTDPA LYQQLVGRSA AQVLQDGASV
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