Gene Rfer_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0103 
Symbol 
ID3962804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp106284 
End bp107204 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID637914941 
Producthypothetical protein 
Protein accessionYP_521395 
Protein GI89898924 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.504217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCCC TGTTTCTGCT GCAACGCTGG CCGGCACAAC TGCGCCGCCT CGGCCGCTGG 
CTGGCCGTAG CAAGCGTGGG CCTGCTGCTT TTGCTGTCAC AGGCGCAGGC GCAATTGGCG
GTGCCGACGC TGGTTGCCCA TGTCATGGAC GCCACCGGCA CGCTGAACGC CGTGCAAGTG
CAGCAGCTGG AGGCCAAACT CACCGCCTTT GAGCAGAGCC GGGGCACGCA AATGGTGCTG
CTGCTGGTGC CAACGACGCA GCCCGAGGAC ATCGCCAGTT ACAGCAACCG GGTCGCCAAC
AGCTGGAAAA TAGGCCGCAA GGAGATCGGC GACGGACTCT TGCTGGTGGT GGCCAAAGAC
GACCGGCGGG TCCGCATTGA AGTTGCCAAG ACGCTGGAGG GCGCCATTCC CGACCTGGCG
GCCAAGCGCG TCATTGACCA GGCCATCACC CCGCGTTTCA AGCAGGGGGA CTTCGCCGGT
GGACTCGACG CGGCGGTGGA TCAACTGATG GCGCTCATCA AGGGTGAGGC CCTGCCCGTG
CCCGTGGCGG CTGTCCGCGG CGTGAAAAAC GGTTTTCAAT GGACGGACCT TGCCATCTTC
ATGTTCTTTG CCGTCCCGGT GGTGGGCGCC GTGGCGCGCA GCATTTTCGG TACCAAGCTG
GGGTCTCTGG CAACCGGTGG GCTCGTCGGG GGCATTGCCC TGCTCGTCAC CGCCAGCCTG
GCAATCGCAG CACTGGCGGC GCTGGTCGGG TTTGTGTTCG CTCTTTTCTC GGGTTTGATG
CCCGGCGGCG GACGCGGCGT TGGTCGCCAT GGGGGCTGGG GTGCTGGCGG TGGCGGGTTT
GGGGGTGGTT TTGGCGGCGG AGGCTTTGGC TCCGGCGGCG GTGGTGACTT TGGTGGCGGT
GGTGCCTCGG GACGCTGGTG A
 
Protein sequence
MRPLFLLQRW PAQLRRLGRW LAVASVGLLL LLSQAQAQLA VPTLVAHVMD ATGTLNAVQV 
QQLEAKLTAF EQSRGTQMVL LLVPTTQPED IASYSNRVAN SWKIGRKEIG DGLLLVVAKD
DRRVRIEVAK TLEGAIPDLA AKRVIDQAIT PRFKQGDFAG GLDAAVDQLM ALIKGEALPV
PVAAVRGVKN GFQWTDLAIF MFFAVPVVGA VARSIFGTKL GSLATGGLVG GIALLVTASL
AIAALAALVG FVFALFSGLM PGGGRGVGRH GGWGAGGGGF GGGFGGGGFG SGGGGDFGGG
GASGRW