Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0024 |
Symbol | |
ID | 3960453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 25444 |
End bp | 27717 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637914863 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_521317 |
Protein GI | 89898846 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTG CTGCAGCCCC CGCGATCTCC CCTGGTTCAT TGGACATAGG CATTGGTGGC ATGACCTGCG CCTCCTGCGT GGGCCGGGTC GAGCGCGCCC TGAAAAAAGT GCCGGGCGTG CAAAGTGTGG CGGTTAATCT GGCCACCGAG TCGGCCCGTA TTGCCTACGC GCCGACCGAG CAAATGGAGG CGCGCCTGCG CCGGGCGGTG CGCGATGCGG GTTACGAGCC GCTGGCCGCA GACGCCACCA TCGACGCGCC CGATGCCTCG CCCTGGGCGG GTTTCATGCC GGTGGCGATT GGCCTGGCGC TGTCGGCGCC GCTGGTGCTG CCGATGCTGG GCAACCTGGC GGGCTGGCAC TGGATGCTGC CGGCCTGGCT GCAGTTTGCG CTGGCCACAC CGGTGCAATT CATTCTCGGC GCGCGCTTTT ACAAGGCCGG CTGGCACGCG CTGAAAAATC TGGCTGGCAA TATGGACTTG CTGGTGGCCC TGGGCACCAC GGCAGGCTGG CTGCTGTCGA TGTGGCTGTG GCTGAACGCC GCGCCGGGTG TCATGGCGCA CCTGTATTTT GAAGGCTCGG CCGTGGTGAT CACCATGGTG CTGCTGGGCA AATGGTTAGA GGCCCGCGCC AAGCGGCAAA CCACCTCGGC GATTCGGGCG CTGCATGGCC TGCGCCCGGC CACCGCGCAT TTGATCAGCA TTGATGGTGA GGTCGATGTG CCGGTGGCCG AGGTGCTGGT GGGCGACCGG CTGGTGGTCA AACCCGGCGA GCGTTTGCCG GTGGACGGCC TGCTGCAGGA GGGTCAAACC CAGGTTGATG AATCGATGCT GACCGGCGAG CCGCTGCCCA TCGTCAAAGA CCCCGGCGCG GCGCTCACCG GCGGCTCCAT CAACGGTGAC GGCCGCATCG TGATGCAGGT CAAGGCGGTC GGCAGCGAGA CGGTGCTGGC CCACATCATC CGCCTAGTCG AAGACGCGCA GGCGGCCAAA GCGCCGATTC AGCGCCTGGT CGATCAGGTC AGTGCGGTGT TTGTGCCGGT GGTGCTGGGT ATTGCCCTGA TCACCCTGCT GGGCTGGTGG CTGAGCGGCC ACCCGTTTGA AGTGGCCGTG ATCAACGCCG TGACGGTGCT GGTGATTGCC TGCCCCTGCG CGCTCGGGCT GGCCACGCCG GCCGCGATCA TGGCCGGTAC CGGTGTCGCG GCCAAGTACG GCATTTTGAT CAAGGACGCG CAGGCGCTGG AGCTGGCGCA CAAGGTGGAC GTGGTGGTGT TTGACAAGAC CGGCACCCTG ACCGTGGGCC AGCCGCGTTT GACGGCATTT CAAGCCGTGG CGGGTGGCGA TGAGGTGACG CTGCTGGCCG CCGCGGCCAG CTTGCAAAGC GGCAGCGAAC ACCCGCTGGC ACGCGCCGTG GTGGCGGTGG CCAGCGAACG CGGCCTGGCC ATCCATCCGC CCATAACTGT GCGGGCCGTG CCGGGGCGCG GCACCGAGGG CGAACTGCGC GCCACCGATG GCAACGAGGC AGCGCAACCG AGCTACCTGA TCGGCAGCCT GCGCTGGATG GACGAGCTGG GGGTGGACTG GCGCGCGCTG GCAGCGCCCG CCGCCACGCT GCAGGGCAGC GGCGCCACCG TGTCGCTGCT GGCGCGGCGC TGGGTGGCCA CAGCCGCGCA AGCCGAACGC ATTGAGATCC TGGCGCTGCT GGCGTTTGCC GATGAACCCA AACCCGGCGC CCAGGCCGCC GTGGCCGCTT TGCGCGCGCG CTCGATCAAG ACCGTGATGA TTTCCGGCGA CAACCAGGGC GCCGCTAGAG CCATGGCGCG GCGTCTGGGC TTTCGCCCTG AGAGTGACGA AGTGCGCGCC GAGGTGCTGC CCGGCGACAA GGCCGCGCAG GTGCTGGCGC TCAAGAACGG GGGCCATACC GTAGCCATGG TCGGTGACGG CGTCAACGAC GCGCCCGCCT TGACCGCCGC CGACGTCGGC ATGGCGATGG CCAACGCGGG CGGCGGCGGC TCGGATGTGG CGATGCATGC CGCGGGCATC ACGCTGATGC GCGGCGACCC AGGCTTGGTG GCGGCCGCGC TGGACATCTC CGACCGCACC GTGGCCAAAA TCCGGCAAAA CCTGTTCTGG GCCTTTGCCT ACAACGTGGC CGGCATTCCG CTGGCGGCGC TGGGCTTTTT GAATCCGGTC GTGGCCGGGG CGGCGATGGC GATGAGCTCG GTCAGTGTGA TGAGCAATGC GCTGTTGCTG AAGCGCTGGA AGCCGAGGAA ATAA
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Protein sequence | MNTAAAPAIS PGSLDIGIGG MTCASCVGRV ERALKKVPGV QSVAVNLATE SARIAYAPTE QMEARLRRAV RDAGYEPLAA DATIDAPDAS PWAGFMPVAI GLALSAPLVL PMLGNLAGWH WMLPAWLQFA LATPVQFILG ARFYKAGWHA LKNLAGNMDL LVALGTTAGW LLSMWLWLNA APGVMAHLYF EGSAVVITMV LLGKWLEARA KRQTTSAIRA LHGLRPATAH LISIDGEVDV PVAEVLVGDR LVVKPGERLP VDGLLQEGQT QVDESMLTGE PLPIVKDPGA ALTGGSINGD GRIVMQVKAV GSETVLAHII RLVEDAQAAK APIQRLVDQV SAVFVPVVLG IALITLLGWW LSGHPFEVAV INAVTVLVIA CPCALGLATP AAIMAGTGVA AKYGILIKDA QALELAHKVD VVVFDKTGTL TVGQPRLTAF QAVAGGDEVT LLAAAASLQS GSEHPLARAV VAVASERGLA IHPPITVRAV PGRGTEGELR ATDGNEAAQP SYLIGSLRWM DELGVDWRAL AAPAATLQGS GATVSLLARR WVATAAQAER IEILALLAFA DEPKPGAQAA VAALRARSIK TVMISGDNQG AARAMARRLG FRPESDEVRA EVLPGDKAAQ VLALKNGGHT VAMVGDGVND APALTAADVG MAMANAGGGG SDVAMHAAGI TLMRGDPGLV AAALDISDRT VAKIRQNLFW AFAYNVAGIP LAALGFLNPV VAGAAMAMSS VSVMSNALLL KRWKPRK
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