| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_D6466 |
|---|
| Symbol | |
|---|
| ID | 3607312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007337 |
|---|
| Strand | - |
|---|
| Start bp | 22778 |
|---|
| End bp | 23545 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637689324 |
|---|
| Product | chlorocatechol 1,2-dioxygenase |
|---|
| Protein accession | YP_293621 |
|---|
| Protein GI | 72384268 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02465] chlorocatechol 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAAA GAGTCAAGGA TGTTGTCGAT GCGATCGTCG CGGCGGTACA GCGGGTGCTC
GACCAGAAGG AGGTTACTGA GGCGGAATAC CGAACTGCGG TTCATTACCT CATGCAAGTA
GCCGAACAGC GTGAAACCGC TCTTCTTTGC GATGTTTTTT TCAATAGCAC CGTGGCTGCG
ACGAAGGCTC GTATTAGCGA AGGTTCAACG CCTGCTATCG AGGGACCCTA CTATCGCGAC
GACGCCCCTC TGGTCGATGA CCGGCTCAAG ACTTACGACA CGGACGACCA CAAGCCTTTG
CTTATCCAGG GAACGGTCAA AGCGGTCGAC GGGAGCGTTG TCGAGGACGT GACGATTGAT
GTCTGGCATT CGACGCCCGA TGGGAAGTAC AGCGGTTTCC ATGACGACAT CCCGACTGAT
TTTTATCGAG GGAAGCTCAG GGTGGGCACC GATGGCAGCT TCCGCGTGCG CACAACGATG
CCGGTGCCGT ATCAGATCCC GGATCAGGGT CCCACGGGCG CATTGCTCGA AACCATGGGT
GGTCACTCGT GGCGTCCCGC TCATGTACAT TTCAAGGTGA AGGCGCCGGG ATATGAAACG
TTGACCACGC AGTACTACTT CGAAGGTGGA GATTGGATCA CGGACGACTG TTGCAACGGC
GTCCAGTCTA GTCTGATTAC TCCCGATATT GTGGAAGAGG GTGTCCGCCT GATGAACATC
AACTTCGTTA TCGAGCCCGC GCGTGCGCAG GCGGGGGCAA ACCCGTGA
|
|---|
| Protein sequence | MNKRVKDVVD AIVAAVQRVL DQKEVTEAEY RTAVHYLMQV AEQRETALLC DVFFNSTVAA
TKARISEGST PAIEGPYYRD DAPLVDDRLK TYDTDDHKPL LIQGTVKAVD GSVVEDVTID
VWHSTPDGKY SGFHDDIPTD FYRGKLRVGT DGSFRVRTTM PVPYQIPDQG PTGALLETMG
GHSWRPAHVH FKVKAPGYET LTTQYYFEGG DWITDDCCNG VQSSLITPDI VEEGVRLMNI
NFVIEPARAQ AGANP
|
|---|
| |