| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C6288 |
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| Symbol | |
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| ID | 3607759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | - |
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| Start bp | 458401 |
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| End bp | 459840 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637689151 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_293448 |
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| Protein GI | 72384094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.372426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTGC TTCCTAGCCT TCCTGCATCC ATCTGGCGAC TTCGACCGCT GTCCATTTCC
CTGCTGGCAC TGACGCTCGC TGGGTGTTCG CTCGCACCCC ATTTGGCAAA GCCAGACGCC
CCGATTCCAG CGGCTTGGAG TGGCCCCGCC GTTGGAGAGG GAACTTCCTT CGGCTTGGAC
GAGTTGGTTG TCGACCCGGT TCTCTGTCAA CTCATTCAAT CGGCCGTACA GAACAACCGA
GATCTGCGGC AGGCCATGCT AAACGTCGAC GCGGCCCGTC TCCGATACCG TGTCCAGGGT
GCCGAGCGCT TACCAACTAT CGAGGGGCGC ACATCGCTAC TCCGCAGCAA GTCATCGATT
GACGATCCTT CTGGCAATGG GCGACAGGTC AGCGAGGTAT ACCGAAGCGA GGCCGCAGTC
CCCAGCTTCG AGGTTGACCT ATGGGGCCGT TTGCGGAATC TCTCCGATGC CGCGTTCGCC
GAGTACCTGG CCGAGGAGCA GAACGCGCAG TCGGCAAGAT TGACTCTGAT CTCTGAGGTC
ATGTCGGTGT ATGTCCGCAG AATCGGCGCG CTGGCACGCT TCGAGGCTGT GTCGGGTACG
CTCGCTGCGC GCCAAAGAAC CTTGGACCTA TTGACGTTGC GCCGAGACGC GGGGGCAACA
TCGGCATTGG AGCTCGAAGA TGCTCGTGGA CTGACGGAGT CCGCAGCAGC TGATCTGGAG
GCGGTACGCC GGGATGTGGA GCACGCTAAC AACGCGTTGC TCCTTTTGAC CGGCCTGATC
GCCTTGCCTG ATATGCCACA ACACGCTTCT GACAGTCCAA CGTCCGTGGT GACGAGGTTG
GCGGCGGGGG CGCCTTCAGA ATTGCTATAC AACCGTCCCG ACGTGCGTGC TGCCGAGCAT
GCGCTTCATG CCCGCAATGC TGATATCGGT GCCGCTCGTG CTGCATTCTT CCCTCGGATC
TCATTGACCG GAGAAGCCGG CAGTCTAAGC GGTGATCTAT CTGGACTCTT TGCAGGAGGC
CGCAGCTTTT GGAACTTCCT GCCGAGTATT CAAATCCCGA TCTTCTCGGG TGGCCGCAAT
CGATCAAACC TTGAATTGGC CACGGTTCGC AAAGAGATTG CCATTGCGAA ATATGAGGGG
ACCGTCCAGG TTGCCTTCCG CGAAGTGGCT GACGCTCTGT CCACCTACCA GACGCTGGGC
CGCGAACTAT CACACCGAAA AGCGTTGATG GAGAGCAGCA AGGTCTCGTT GGCCCTATCT
GAGCAACGTC AAAAATCCGG ACTGGACAGC AACCTGCGCT ATCTCGATGC GCAGCGCGTT
GCGTTGACCA ACGAGGTCGC CTTCATTGAC GCGTCCACCG CGATGCAGGT TTCCATCGTT
CAGACGTTCA AGGCTCTCGG TGGGCGCTGG TACCAGCCAG CCACCATGCC CCGAAGCTGA
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| Protein sequence | MKLLPSLPAS IWRLRPLSIS LLALTLAGCS LAPHLAKPDA PIPAAWSGPA VGEGTSFGLD
ELVVDPVLCQ LIQSAVQNNR DLRQAMLNVD AARLRYRVQG AERLPTIEGR TSLLRSKSSI
DDPSGNGRQV SEVYRSEAAV PSFEVDLWGR LRNLSDAAFA EYLAEEQNAQ SARLTLISEV
MSVYVRRIGA LARFEAVSGT LAARQRTLDL LTLRRDAGAT SALELEDARG LTESAAADLE
AVRRDVEHAN NALLLLTGLI ALPDMPQHAS DSPTSVVTRL AAGAPSELLY NRPDVRAAEH
ALHARNADIG AARAAFFPRI SLTGEAGSLS GDLSGLFAGG RSFWNFLPSI QIPIFSGGRN
RSNLELATVR KEIAIAKYEG TVQVAFREVA DALSTYQTLG RELSHRKALM ESSKVSLALS
EQRQKSGLDS NLRYLDAQRV ALTNEVAFID ASTAMQVSIV QTFKALGGRW YQPATMPRS
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