Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B4828 |
Symbol | |
ID | 3612554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 1531211 |
End bp | 1534222 |
Gene Length | 3012 bp |
Protein Length | 1003 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637694255 |
Product | sarcosine oxidase, alpha subunit, heterotetrameric |
Protein accession | YP_299020 |
Protein GI | 73538653 |
COG category | [E] Amino acid transport and metabolism [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.527733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA AAGACCGTCT CGGCACGGGC GGCCGCATCC ATCGCGGCGA GCCGCTGACC TTCACGTTTA ACGGACGTAC CTACCAGGGG TATCAGGGCG ACACGCTGGC ATCGGCGCTG CTCGCGAACG GCGTGCGCTT CGTTGCACGC AGCTTCAAGT ACCACCGTCC CCGCGGCATC GTGACCGCCG ATGTCGCGGA GCCGAATGCC GTGGTGCAAC TGGAGCGCGG CGCTCACACG GTGCCGAATG CCCGTGCGAC GGAGATCGAA CTGTACCAGG GGCTCGTCGC GACGAGCGTC AACGCGGAGC CGGATCTGGA GCGCGACCGC ATGGCGGTCA ATCAGAAGTT TGCGCGCTTC ATGCCCGCCG GCTTTTACTA CAAGACATTC ATGTGGCCGC GCAAGATGTG GCCCACGTAT GAAGAGAAGA TCCGCGAAGC GGCCGGCCTC GGCAAGGCGC CGACAGAACT GGACGCCGAT CGCTACGACA AGTGCTACGC GCATTGCGAC GTGCTGGTGG TTGGCGGCGG GCCGGCAGGC CTCACCGCCG CGCATGCGGC GGCCGTGGGT GGCGCGCGCG TGATCCTCGT CGACGACCAG CGTGAACTCG GCGGCAGCCT GCTGTCCGGC CGGAGCGAGA TCAACGGCAA GCCCGCGCTG CAGTGGGTCG GCGACATTGA GGCCAAGCTG CGCAAGCTGC CGGACGTGAC GATCCTGTCG CGCAGCAACG CGTTCGGCTA CCAGGACCAC AATCTTGTTA CTGTCACGCA GCGCCTCACT GACCACCTGC CCGTATCGAA GCGCCGTGGC ACGCGCGAAC TGCTTTGGAA GATCCGCGCT AAACGGGTGA TCCTTGCGAC CGGCGCGCAC GAACGCCCCA TCGTCTTCGG CAACAACGAC CTCCCGGGCG TGATGATGGC GTCGGCGGTA TCGACCTACA TTCATCGCTA CGGCGTGCTG CCGGGGCGGG ATGCGGTTGT GTTCACCAAC AACGACCGCG GCTATCAGGC AGCGCTCGAC CTGAAGGCGA ACGGTGCGAA AGTGACCGTC GTCGATCCGC GCGCCTCGAC CAGTGGCGCG CTGCCCGCCC TCGCGAAGCG GCAGGGCGTG ACTGTCATGA ACGGCGCGGT CGTGATGGCC GCGTCCGGCA AGCGGCACGT CACGTCGGTC GATGTGACTT CCTATGCGAA CGGACAGGCA GGCAGCAAGG TGTCGAAGAT TCCTTGCGAT CTCGTCGCCA TGTCGGGCGG CCTGAGTCCG GTGCTTCACC TGTTCGCGCA GTCGGGCGGC AAGGCGCAGT GGAGTGATGA AAAGACGTGC TTCGTACCGG GCAAATCGCT GCAGGCCGAG GTGAGCGTGG GTGCAGCGGC GGGCGAGTTC AACCTTGCGA TGGCGCTCCC GCTCGCGCTC GAAGCTGGGA TCGACGCTGC CAAGGCCGCC GGCTTCCGTC CCGAAAAGGC CCCGGCCGTG CCGAAGGTCA CGCCTGTCGC CGAGGGCGCG CTACTGCCGC TCTGGCTTGT CGGCAGCCGC GCGGCTGCCG CACGCGGGCC GAAGCAGTTC GTCGACTTCC AGAACGACGT CGCCGCGTCG GACATCCTGC TCGCCGCGCG CGAAGGCTTC GAGTCCGTCG AGCATGTGAA GCGCTACACC GCCATGGGCT TCGGTACCGA CCAGGGCAAG CTCGGCAACA TCAACGGGAT GGCGATCCTG GCGCAGGCGC TTGGCAAGTC GATTCCCGAG ACCGGTACGA CGACGTTCCG CCCCAACTAC ACGCCGGTCA CGTTCGGCAC GTTCGCCGGG CGGGAGGTCG GCGACTTCCT TGACCCGATC CGCAAGACCT GCATTCACGA ATGGCACGTC GAGCATGGCG CGCTGTTCGA GGACGTCGGC AACTGGAAGC GACCCTGGTA CTTCCCGAAG AAGGGGGAGA ACCTGCACGC GGCGGTGAAG CGCGAGTGCC TCGCGGTGCG CAACAGCGTC GGCATCCTCG ATGCTTCGAC GCTCGGCAAG ATCGACATCC AGGGCCCGGA CGCGGTCACG CTGCTGAACT GGATGTACAC GAATCCGTGG AACAAGCTTG AAGTCGGCAA GTGCCGTTAT GGCCTGATGC TCGACGAGAA CGGCATGGTG TTCGACGACG GTGTCACGGT GCGGCTCGGC GAGCAGCATT TCATGATGAC AACGACCACG GGCGGCGCCG CGCGCGTGCT GACCTGGCTG GAGCGCTGGC TGCAGACCGA ATGGCCGCAC ATGAAGGTTC GGCTGTCATC GGTGACCGAC CACTGGGCGA CGTTCGCGGT GGTTGGCCCG AACAGCCGCA AGGTGCTGCG CAAAGTCTGC GAGGACATCG ACTTCGCGAA CGATGCGTTC CCGTTCATGA GCTATCGGAA CGGCATCGTC GCCGGCGCGA AGGCGCGGGT GATGCGGATC AGCTTCTCGG GCGAACTGGC GTACGAAGTG AACGTGCCCG CGAACGCCGG CCGTGCCGCG TGGGAAGCGC TGATGACCGC TGGCGCCGAG TTCGACATCA CACCGTACGG CACGGAAACC ATGCACGTGC TGCGCGCGGA GAAGGGCTAC ATCATCGTCG GCCAGGATAC GGACGGTTCG GTCACGCCGT ATGACCTCGG GATGGGCGGC GTCGTCGCGA AGTCGAAGGA CTTCCTGGGC AAGCGTTCAC TGACGCGCTC GGATACGGCG AAGGAAGGCC GCAAGCAGTT CGTCGGCCTG CTGACCGACG ACGCGGAGTT CGTGCTGCCC GAGGGCGCGC AGATCCTTGC GCCGGGTACG CGCGTGTCGA CGACCGAGCC AACGCCGATG ATCGGCCATG TGACGTCGAG TTACTACAGT CCGATCCTGA AGCGCTCGAT CGCGCTCGCC GTGGTGAAGG GCGGCCTGGG CAAGATGGGC CAGAGCGTTG CGATCCCGCT GGCCGACGGC AGGCGCGTGA TGGCGAAGGT TTCCAGCCCT GTTTTCTACG ATACCGAAGG AGTCCGCCAG AATGTGGAAT GA
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Protein sequence | MSQKDRLGTG GRIHRGEPLT FTFNGRTYQG YQGDTLASAL LANGVRFVAR SFKYHRPRGI VTADVAEPNA VVQLERGAHT VPNARATEIE LYQGLVATSV NAEPDLERDR MAVNQKFARF MPAGFYYKTF MWPRKMWPTY EEKIREAAGL GKAPTELDAD RYDKCYAHCD VLVVGGGPAG LTAAHAAAVG GARVILVDDQ RELGGSLLSG RSEINGKPAL QWVGDIEAKL RKLPDVTILS RSNAFGYQDH NLVTVTQRLT DHLPVSKRRG TRELLWKIRA KRVILATGAH ERPIVFGNND LPGVMMASAV STYIHRYGVL PGRDAVVFTN NDRGYQAALD LKANGAKVTV VDPRASTSGA LPALAKRQGV TVMNGAVVMA ASGKRHVTSV DVTSYANGQA GSKVSKIPCD LVAMSGGLSP VLHLFAQSGG KAQWSDEKTC FVPGKSLQAE VSVGAAAGEF NLAMALPLAL EAGIDAAKAA GFRPEKAPAV PKVTPVAEGA LLPLWLVGSR AAAARGPKQF VDFQNDVAAS DILLAAREGF ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AQALGKSIPE TGTTTFRPNY TPVTFGTFAG REVGDFLDPI RKTCIHEWHV EHGALFEDVG NWKRPWYFPK KGENLHAAVK RECLAVRNSV GILDASTLGK IDIQGPDAVT LLNWMYTNPW NKLEVGKCRY GLMLDENGMV FDDGVTVRLG EQHFMMTTTT GGAARVLTWL ERWLQTEWPH MKVRLSSVTD HWATFAVVGP NSRKVLRKVC EDIDFANDAF PFMSYRNGIV AGAKARVMRI SFSGELAYEV NVPANAGRAA WEALMTAGAE FDITPYGTET MHVLRAEKGY IIVGQDTDGS VTPYDLGMGG VVAKSKDFLG KRSLTRSDTA KEGRKQFVGL LTDDAEFVLP EGAQILAPGT RVSTTEPTPM IGHVTSSYYS PILKRSIALA VVKGGLGKMG QSVAIPLADG RRVMAKVSSP VFYDTEGVRQ NVE
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