| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4646 |
|---|
| Symbol | |
|---|
| ID | 3614411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1333455 |
|---|
| End bp | 1335581 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637694075 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_298840 |
|---|
| Protein GI | 73538473 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGA GCCGATGCGG CAACGAGCCC GCCGCACCCC AGATCGCCCT GCGCGCCACG
GCGCTCGCCG TTTCGTTGCT GTGCATGGCG CCATTGGCGT TCGCCCAGAA GGTGGATGCG
CAATCGGGGG AGAGTGGCAA TGTCGAGCAG GTGCTCGATA CCGTGCAGGT CACTGGCAAC
TGGCTCGGCA CCGGGCTGCA GAACAGCGTG AAGACCTTCC CCGGCGCGCG CACCGTGGTG
GGAGAAGAAC AGATCGAACA GAGCGGCGCA TCTAGCATCA GCGACGTCAT GCGCCGCATT
CCCGGCGTGC AGTCGACCGA TAACTCCGGC ACGTCCGGCA GCGCCATTTC CCTCAACATC
GGCGTGCGTG GCCTGACCGG CCGGTACTCG CCACGCTCTA CAGTGTTGCT TGACGGCATT
CCGATGGCAG TCGCCCCGTA CGGGCAACCG CAGGTTTCAT TTGCGCCGGT GAGCCTCGGC
AATATCGACT CGATCGACGT GGTGCGCAGC GGTGGCGCGG TGCGATACGG CCCGCAGAAC
GTCGGCGGCA TCATCAACTT CAACACCAGG CCGATCCCCA CCAGCCCGGG CATCACCGGG
GATGCGTCGA TCCGTGAAAA CATCTACACC GAAGGCGGCG GCAGCAATAC GCAGTACAAC
GCGTTCGTGG GCACCACGCT CGACAGCGGG CTCGGACTGG CCGTGCTGTA CTCGGGCATG
ACGGGCCGCG AATGGCGCAA GGGCAGCGAT GACGACGTCA ACGATCTCGC CGTGAAGTTT
GCCTACGACA TCAACAACAC CTCGCAGGTC TACGGCAAGG TCTCGTACTA CGACGTGCGC
TCGCGCACGC CGGGCGGCCT GACGGTCGCG CAATACAATG CCGACCCGTT CCAGAACACG
CGGCCGAACG ACTACTGGAG CGGCAACCGC ACGGCGTTCG ACCTCGGCTA CGTGAACACG
ATCTCCGGCA ACCAGGAATT CGAGATCCGC ACGTTCTTCA ACGAGAGCTA TCGCCAGAGC
ACGCTGCAGC AAAGCGCCAC CGTGATCGCG CACCAGCCGC GCAACTACAC CACGTTCGGC
ATCGAGCCGC GCTATACGCA GCGCCTGGCG CTGGGGCCGA CGACGCATGA CATCACCGTC
GGCTACCGCT ATATCCGCGA ACGCGGCGAT GACAACGCCT TCAACCAGAA TCCGCGTACG
GGCGTGGTCG GCCCGACCAC CACGTTCGAC AACGCCACCG ATGCGCATGC CGTTTATATC
GACGACCGCA TCGCCGTCGG CAACTGGCGC ATCGTGCCGG GTGTGCGTTT CGAACATATC
GACACCACAC GCCAGCAGCG CGGCACAACC ACGCAGTTCG ACAGCATGAA CAACAAGGCA
CTGCCGTCGA TCAACGTCTC GTACCTCGTC AACAATGCGT GGACTGTGTT CACCGACTAC
AGCACGTCGT TCGGCCCGGT GCAGAACACG CAGCTCAACT CGCAGACGCC GAGCAATCCG
CTGCAGCCGG AAGTGGCGCG CACGTTTGAA GTCGGTACCC GCTGGACCGA CAACCGCATC
AAGGCCGAGC TGACGGCGTT CAAGATCAAG TTCGACAACC AGATCCAGCA AGTGCCGGGC
CTGTTCCCCG CCACGTTCCA GAACATCGGC GCGACTGATC ATGATGGTGT CGAAACCGCG
ATCGACTACA CGTTCGACCG CGCGAGCGTG CTTGGCGGCC TGAACGTCTA CGCCAACTAC
ACCTACACGC GCGCGATCCA GAAGTCGGGC GCCACGGCCG GCATGGACGT CCCGTTCTAC
TCGCGCAACA CCGATACCAT CGGCGCGCGC TACAACTGGC GCAACTGGAC CTTCAACGCT
TCGACCACAC ACCAGAGCGC GCAGTACTCG GACCTGGCCA ACACCGTCGC CGAGTCGGCG
GATGGCAGCG TGGGCCGCAT TCCTGGCTTC CGCACCTGGA ACCTGCAGGC GATGTTCACG
GTTCCGCAGT GGAAACGTAC CGACATCACC ATCGGCATCA ACAACCTGTT CGACAAGCGC
TACTACACGC GTACGACGGA CAGCAATGCG GGGCGTCTGG TTGGCGCGCC GCGCATGGTG
TATATCCAGG CGCGCGCCGG GTTCTGA
|
|---|
| Protein sequence | MKSSRCGNEP AAPQIALRAT ALAVSLLCMA PLAFAQKVDA QSGESGNVEQ VLDTVQVTGN
WLGTGLQNSV KTFPGARTVV GEEQIEQSGA SSISDVMRRI PGVQSTDNSG TSGSAISLNI
GVRGLTGRYS PRSTVLLDGI PMAVAPYGQP QVSFAPVSLG NIDSIDVVRS GGAVRYGPQN
VGGIINFNTR PIPTSPGITG DASIRENIYT EGGGSNTQYN AFVGTTLDSG LGLAVLYSGM
TGREWRKGSD DDVNDLAVKF AYDINNTSQV YGKVSYYDVR SRTPGGLTVA QYNADPFQNT
RPNDYWSGNR TAFDLGYVNT ISGNQEFEIR TFFNESYRQS TLQQSATVIA HQPRNYTTFG
IEPRYTQRLA LGPTTHDITV GYRYIRERGD DNAFNQNPRT GVVGPTTTFD NATDAHAVYI
DDRIAVGNWR IVPGVRFEHI DTTRQQRGTT TQFDSMNNKA LPSINVSYLV NNAWTVFTDY
STSFGPVQNT QLNSQTPSNP LQPEVARTFE VGTRWTDNRI KAELTAFKIK FDNQIQQVPG
LFPATFQNIG ATDHDGVETA IDYTFDRASV LGGLNVYANY TYTRAIQKSG ATAGMDVPFY
SRNTDTIGAR YNWRNWTFNA STTHQSAQYS DLANTVAESA DGSVGRIPGF RTWNLQAMFT
VPQWKRTDIT IGINNLFDKR YYTRTTDSNA GRLVGAPRMV YIQARAGF
|
|---|
| |