| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3901 |
|---|
| Symbol | |
|---|
| ID | 3613292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 531118 |
|---|
| End bp | 532218 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637693335 |
|---|
| Product | helix-turn-helix, AraC type |
|---|
| Protein accession | YP_298102 |
|---|
| Protein GI | 73537735 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGA CTACGGTTCT GCGCAGCGCG GAATCGGACC TCACGCTGCA TGGACGAGAC
GCGATGGGCA CGTTGATGCG TACCGGGACG CTGACCAACT TTCTCAAGGT TGCGCAGCAA
CTGGACTTTG ACCCTCAGCC GCTGCTGCGC AAGCTGGGGT TGACCAAGGA AATGCTTGCC
GACCCGGAAT GCCTGATTCC CGGGAGTGCT TCCGTCACCT TGCTGAAAGA GTCGGCACGC
CTGACCCAAT GCCCGACCTT CGGACTGCGC GTGGCCGAGC GCTGGCAGCT GTCCGACCTC
GGCGTCATCA GCGTGCTGCT CACGCACCAG AGCACCCTGC GCGACGCCGT TGGCACCCTG
ATCCAGTATC GGCACCTGCT GAACGAGTTC CTGGTCATCC GCATGGAGGA TGTCGGCAGA
AAGGTGATCG TGCGCGAGGA ACTCGTCGCG GATGAGGCCG GCACCTCCAT ACAGTCGACC
GAACTGGTGC TGGGCTCGCT GTCACGCCTG TGCAGCACGC TGATGGGCGC CACGTGGCAC
CCGCTGAGCG TCCATTTCAC CCACGATCCG CCACCTGACC TGCGGCTGCA CCGCCGCGTG
TTCGGCGGCA AGCTGGAATT CGCCAGCTCG TTCAATGGCA TGATCTGCCG CGCGGCGGAC
ATGGATTTCC CCAACCCCAT CGCCGACCCC GTCATGGCAC GCCACGCGCG GCGCTTGCTC
GAGGGGCTGC CGGGTGCCAA AGAGCCGTCC ATCGTGCTTG AAGTGCGAAA GGCCATCTAT
CTGTTGCTGC CCTTGGGGCG AGCGACCATC GAGCAGGTAG CGCAGGGCCT TGGCATGAAC
GTGCGAATGC TGCAGCGCCA GCTCGAAAGC GCGGGGATGG TGTTCTCGGA CATGGTCAAC
GGCGTACGGC GCGATCTCGT CATCCACTAC ATGGACAACA AGAGCTACAC GCTGGGGCGC
ATTGCCCAGT CGCTCGGATA CTCGGCCTAT GGCTCCTTCG TACGCTGGTT TGCCGCGCAG
TTCGGCATGA CGCCGACGCG GTGGCAGAGC CTGCGCCAGC AAAAGGAAGA CGGCCGGAGT
CCGATCCAGA TCCACTGTTG A
|
|---|
| Protein sequence | MSRTTVLRSA ESDLTLHGRD AMGTLMRTGT LTNFLKVAQQ LDFDPQPLLR KLGLTKEMLA
DPECLIPGSA SVTLLKESAR LTQCPTFGLR VAERWQLSDL GVISVLLTHQ STLRDAVGTL
IQYRHLLNEF LVIRMEDVGR KVIVREELVA DEAGTSIQST ELVLGSLSRL CSTLMGATWH
PLSVHFTHDP PPDLRLHRRV FGGKLEFASS FNGMICRAAD MDFPNPIADP VMARHARRLL
EGLPGAKEPS IVLEVRKAIY LLLPLGRATI EQVAQGLGMN VRMLQRQLES AGMVFSDMVN
GVRRDLVIHY MDNKSYTLGR IAQSLGYSAY GSFVRWFAAQ FGMTPTRWQS LRQQKEDGRS
PIQIHC
|
|---|
| |