| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2884 |
|---|
| Symbol | |
|---|
| ID | 3611022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3159739 |
|---|
| End bp | 3161370 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637692295 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_297089 |
|---|
| Protein GI | 73542569 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAACT CCAAGGCTTC GCCTTCTGGC GCCCCATCAC GCACCGGCGC CCCGGCTGCG
GGCCCCTTCT CCTATCCTGC GTTCACGGTG CTGTGGATCG CCACGGTGCT CTCGAATATC
GGCACCTGGA TGCATGACGT CGGCGCCGGC TGGCTCATGA CGTCGCTCGC GCCGTCGCCG
GCGTGGGTGG CACTGGTGCA GACCGCGACG TCGCTGCCGG TGTTCCTGCT GGCGCTGCCA
GCAGGGGCGC TGGCCGATAT CCTCGACCGG CGCAAGATGT TGCTGGCGGT GCAGATCGTG
ATGGCCCTGG TCGCTGCGGG CCTCGGTGTG GTGGTGTTGC TGGGTGCGGC CACCCCCGTG
CTGCTGTTGC TGTTCACGTT CGCAATGGGC GTGGGAGCCG CCATCACGGC GCCGGCCTGG
CAGGCCATCG TGCCGAGCCT TGTCCCGCGC CAGGCGCTGC AGCAGGCGGT GGCCACCAAC
AGCGTGGGTA TCAATATCAG CCGCGCCATC GGCCCCGCCC TGGCGGGCTT CATCATTTCC
GGCATCGGCG TGGCTGCGCC CTTCCTGATC AATGCCGTCA GTTTCCTGGC TGTGGTGGCC
GCACTCGCGT GGTGGCGCCC GCCTGCACCG GCAGAGCGCC GGCTGCCCAC CGAAGACCTG
CTCGGCGCCA TGCGCGCCGG CGTGCGCTTC GCATGGCATA GCCAGGCGCT CAAGGCCACG
CTCGCGCGCG CGGCAGCCTT CTTTCTGTTC GCGAGCGCCT ACTGGGCCAT GCTGCCGTTG
ATCGTGCGAC AGGTGCTGGC CGGGGGCGCC CAGCTCTACG GCGTGCTGCT TGGCTGCGTG
GGCGTTGGCG CGGTGCTGGG CGCGCTAGGA TTGGGCCGGC TGCGCCAGCG GCTCGGCCCC
GACAGCGTGG TGGCGCTGGG CACCATGGGT ACTGTGGTAG CGCTGTTGCT CTTTGCCACG
ATCCACAACC CCGTGGCAGC CGGTGTGGCG AGCCTCGTAG CAGGCGCCTC ATGGATTGCC
GTGCTGACCA CGCTCAACGT GTCCGCGCAG ACATCGCTGC CGGAATGGGT GCGCGCACGC
GGCCTGTCGA TCTTCGTCAC CGTGTTTTTC GGCTCGATGA GCGCAGGCAG CATCGTCTGG
GGCCAGACCG CAACGCACTT CGGCATCTCC GCCGCGCTGC TGATCGCGAG CGCCGGCGCG
GTGCTGGCCA TCGCGCTGAC GTGGCGCTAC AAGCTGCAGC AGGGCGATTC TTCGCAACTG
GCCCCGTCCA TGCATTGGCC AGCGCCGACG GTCAGCGATG AAGTCGCGCA CGACCGCGGC
CCGGTGCTGA TCACGATCGA ATATCAGGTA CGGCCCGAAA ACGCGGCACG CTTTGTCGCC
ACGCTGGACG AACTGAGTCA GGCCCGCCTG CGTGACGGTG CTTTTTCATG GGGCTTGTTC
GAAGATGCCG CGCAGCCGGG GCGCTACGTC GAATGCTTCC AGGTCGTGTC GTGGCTGGAG
CACCTGCGCC AGCATGAGCG CGTGACGCTC CATGACCGCG ATGTGCAGGA ACGCGCGCTG
GCATTCCACA GCGGCGCGCA ACCGCCAGTG GTATCGCACT TCATCGCGCC GCAGACACCG
CCGGCCGCGT GA
|
|---|
| Protein sequence | MDNSKASPSG APSRTGAPAA GPFSYPAFTV LWIATVLSNI GTWMHDVGAG WLMTSLAPSP
AWVALVQTAT SLPVFLLALP AGALADILDR RKMLLAVQIV MALVAAGLGV VVLLGAATPV
LLLLFTFAMG VGAAITAPAW QAIVPSLVPR QALQQAVATN SVGINISRAI GPALAGFIIS
GIGVAAPFLI NAVSFLAVVA ALAWWRPPAP AERRLPTEDL LGAMRAGVRF AWHSQALKAT
LARAAAFFLF ASAYWAMLPL IVRQVLAGGA QLYGVLLGCV GVGAVLGALG LGRLRQRLGP
DSVVALGTMG TVVALLLFAT IHNPVAAGVA SLVAGASWIA VLTTLNVSAQ TSLPEWVRAR
GLSIFVTVFF GSMSAGSIVW GQTATHFGIS AALLIASAGA VLAIALTWRY KLQQGDSSQL
APSMHWPAPT VSDEVAHDRG PVLITIEYQV RPENAARFVA TLDELSQARL RDGAFSWGLF
EDAAQPGRYV ECFQVVSWLE HLRQHERVTL HDRDVQERAL AFHSGAQPPV VSHFIAPQTP
PAA
|
|---|
| |