| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2659 |
|---|
| Symbol | |
|---|
| ID | 3611576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 2917288 |
|---|
| End bp | 2918814 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692069 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_296864 |
|---|
| Protein GI | 73542344 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTT TCCGCTTGCC GCCCACGCTG CCAGGCCTCC TTGTGCAAGG CCTGGTGGGC
GCTGCATGCC TCTTCGGCCC GATTGCCGCC GCGCAGCAAA AGCCCACTCC CGCCTCGGCA
CCCGTGGCTG TCGCCCCGGC CAAAGCAGAT TCCGCAGCCG TACGCCGGCT CAACCTGGGC
AACAAACCCT GGAAAGGCGA TTTCGACGCG ATGCTCGATC GCCGCGTCAT CCGCGTCCTG
GTGCCATACA GCCGTACGCT GTATTTCAGC GACAAGGGCC GTGAATGCGG CCTGACCGCC
GGACTGGTGC GGGACTTCGA GCGCTATCTG AACAAGACCT ACGCCAGCCG CCTCGGCAAG
CGGCCGCTCA CGGTCATCGT CATTCCCACG ACGCGTGACC GCCTGCTGCC CGACCTGGCC
GCCGGACTGG GCGACATTGC GGCCGGCAAC CTGACAGCGA CCGACGAACG TCTGAAGGTT
GCCGACTTCT CGGCGCCGCG CGACCGCAAG CCGGTGCGCG AACTGATCGT GACCGGTTCG
AAGGCGCCTG CCCTGGCCAG TCTGGACGAC TTGTCCGGCA AGACGGTGCA TGTACGGCGC
GCCAGCAGCT ACTACGAAAG CCTCACGGCG CTCAATGACC AGTTGCGCAA GGCCGGCAAG
GCACCCATGC GCCTGGTGCT GCTGCCCGAT GCGCTGGAAG ACGAAGACGC GATGGAGATG
GCCAATGCCG GCTTGCTGCC CATCCTCGTG GTGGATGACT GGAAGGCCGC GATGTGGGCG
CAGATCCTGC CCAACATCAA GGTACACAAT GACCTCGTCG TCCGCGCGCA AGGCTATGTC
GGCTGGGCCT ACCGCAAGGA CAGCCCGCAG ATGCGCCAGG CGCTGGACGA TTTCTACGTG
AACTACCTGA AGAAGCAGGG CGTCGCCGAA TACCGGCTCA AGCAGATGAT GAAGAGTGTC
CGGCAGATCC GGAACAATAC CAACGACGCC GAGTACAAGC GCTTCGAGCA GACCATTGCC
TTCTTCCAGA AATACGGCAA GGACTACAGC TTCGATCCGT TGATGCTGGC AGCGCAGGGC
TTCCAGGAAT CGCAGCTGAA CCAGAAGGCG CGCAGCCACG TGGGCGCCAT CGGCATCATG
CAGGTCATGC CAGCCACCGG CAAGCAACTC AATGTGGGCA ATATCCAGGA GCCCGAATCA
AACATCCACG CTGGCACCAA ATACATGGAC CAGCTGATGA CGCGGTATTT CCCCGATGCG
CGCTTCTCGG AATCCAACCG GCCGCTCTTT GCATTCGCCA GCTATAACGC GGGCCCGGGC
AATATCGCGA AGATGCGCAC GGAAGCCGCG GCGCGCGGGC TGGATCCGGA CCAGTGGTTC
AACAATGTGG AGATTGTCGT GGCCGAGAAG ATCGGCATCG AGACCACGAC CTATGTGCGC
AACATCTACA AGTACTACGC TGCGTACCGG CTGGCGCAGG ACATGGAGGA CACGCGCGCA
CGCGCGCTGA AGGAAGTCGG TAAATAG
|
|---|
| Protein sequence | MPAFRLPPTL PGLLVQGLVG AACLFGPIAA AQQKPTPASA PVAVAPAKAD SAAVRRLNLG
NKPWKGDFDA MLDRRVIRVL VPYSRTLYFS DKGRECGLTA GLVRDFERYL NKTYASRLGK
RPLTVIVIPT TRDRLLPDLA AGLGDIAAGN LTATDERLKV ADFSAPRDRK PVRELIVTGS
KAPALASLDD LSGKTVHVRR ASSYYESLTA LNDQLRKAGK APMRLVLLPD ALEDEDAMEM
ANAGLLPILV VDDWKAAMWA QILPNIKVHN DLVVRAQGYV GWAYRKDSPQ MRQALDDFYV
NYLKKQGVAE YRLKQMMKSV RQIRNNTNDA EYKRFEQTIA FFQKYGKDYS FDPLMLAAQG
FQESQLNQKA RSHVGAIGIM QVMPATGKQL NVGNIQEPES NIHAGTKYMD QLMTRYFPDA
RFSESNRPLF AFASYNAGPG NIAKMRTEAA ARGLDPDQWF NNVEIVVAEK IGIETTTYVR
NIYKYYAAYR LAQDMEDTRA RALKEVGK
|
|---|
| |