Gene Reut_A1885 details

Gene Information

• Locus tag: Reut_A1885
• Symbol: def
• ID: 3609564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: -
• Start bp: 2064675
• End bp: 2065208
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637691275
• Product: peptide deformylase
• Protein accession: YP_296094
• Protein GI: 73541574
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0792012
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCG AGATTCTCAA GATGGGCGAC GCGCGCCTGC TGCAGCAGGC GCGGCCGGTG 
GAGCGCTTCA ATACGCCTGA ACTGCGCACG CTGATCGAAG ACATGTTCGA CACCATGGAC 
CACGCCAACG GCGCGGGGCT GGCGGCGCCG CAGATCGGTG TGGACCTGCA GGTGGTGATC 
TTCGGCTTCG ACCGGAACCC GCGCTATCCC GATGCGCCGA AGGTGCCGAA GACGGTGCTG 
ATCAACCCGA TGCTCGAAAT GCTGTCCGAC GATCTGGAGG ATGGTTGGGA AGGCTGCCTG 
TCGGTGCCCG GCCTGCGCGG CGTGGTGCCG CGCCATACGC GCCTGAGATA CAGCGGCTAC 
GACCTGATGG GCGGCAGCAT CGACCGCGTC GCCGAAGGCT TCCATGCGCG CGTGGTGCAG 
CATGAGTGCG ACCACCTGCA AGGCATCCTG TATCCCATGC GGGTGCGCGA CTTTACGCGC 
TTCGGTTTTA CCGAGGTATT GTTTCCGGAA TTGCCGCCGA ACAGCGACGA CTGA 

 

Protein sequence

MIREILKMGD ARLLQQARPV ERFNTPELRT LIEDMFDTMD HANGAGLAAP QIGVDLQVVI 
FGFDRNPRYP DAPKVPKTVL INPMLEMLSD DLEDGWEGCL SVPGLRGVVP RHTRLRYSGY 
DLMGGSIDRV AEGFHARVVQ HECDHLQGIL YPMRVRDFTR FGFTEVLFPE LPPNSDD