Gene Reut_A0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0094 
Symbol 
ID3611160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp121375 
End bp123099 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content66% 
IMG OID637689482 
Producthemolysin activator HlyB 
Protein accessionYP_294320 
Protein GI73539800 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2831] Hemolysin activation/secretion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGA TTCTTTCTAA CGCGCGCCGC AAGGCGCGCG GTGTCTTCCC CTTTGCCCCT 
TTCGCCTTGG CATTGCCGTC ACTAGTGGCC GCCCAGGCTC TGCCGTTCTT CCCGAACGTC
ACGCCCAACG ACGCCATCAA GCAGCGCCAG GAGCAGCAGG ACGCGGCCAA GCAGCGCGCC
ATGGCCCGGC CCGACGTGCT GTCGCGAGCC GCCAGCGGTC CCACTTCTGG CCCGCTGATC
CTCCCCACCG AATCGCCGTG CTTCCCGATC AAGGCGGTGG TGTGGGATGA CGCGCAGGCG
TTCGGCTGGC TCACGCCCGA ATCCGAAATC CTCGTCGGTC AGTGCGCCGG CACCAAGGGC
CTGCAGGCCA TCCGCGATTA CTTCGCGACG CGCCTGGTCA ACGAGGGCTT CGTCACCACG
CGCGTGCTGA TTCCGGGACA GAACCTGTCC ACGGGCACGT TGCGCCTGCA GGCGGTCGCG
GGTCGCATCG AGCACGTCAA GTCCGATGAC ACCATTGGCC GGTGGCGCAC GGCCTTGCCG
ACCGGTGCCG GCGGCCTCGT GAACCAGCGC GACTTGGATC AGGGCATGGA GAACATCCGC
CGCCTGCAGG GCCAGGCCGA CGCTACCATC GACCTCGTGC CCGGCGACGA GCCCGGCGAG
GCCGACTTGG TGGTCAAGCC CGGTACCGGC AAGCGCTGGC ATGGCCTGAT CACAGCCGAC
AACGCCGGCC TGCAGAACAC CGGCAAGTAC CAGATGGGCG GCACCCTGAC GGTCGACTCG
CCACTCTTCC TCTACGACAG CCTCACGATT TCGGGGAACA CCAATGCGAA CGTCGGCAAC
GGCGCTGCGG GCACGCGCTC GTCGGCGATC AACTACAGTG TCCCGTTTGG CTACTGGAAT
GCTTTCTTCA ACGCCAATCA GTCTCGCTAC AAGCAGACCG TTGCGGGCTT CGAGGACGAT
ATCGTCTATG GTGGGCGCAG TGCGCAAGTC GAGGCGGGAG TGGGCTACGT GCCTTTCCGC
AATGCGTCGG GCAAGACGTC TGTCTACGGC AAGGTGTTCC GCAAGTCGGC CAGCAGCAGC
ATCAATGGGT TGGATCTGAG CGTCCAGCAC CGCGATTTCG TCGGCTTCGA GGTCGGCGCC
TCGCATCGCC AGTATTTCGG CAACAGCGTC TTCGACATCG GCGCCGCGTG GCGCCAGTCG
TTGCCGGATC ATTCCAAGGC CCCCGGATTC GTGCTGGGCC AGCCCGACTG GGACGGCAAG
TCGGAGATCC TGCAGGGCAA CCTGGGCCTG ATGGTGCCGT TCCAGGTGAG CGGGCAGCGC
CTGCGCTACC AAGGCAGCGT GCGCCTGCAA TACTCGCCCA CGCGCATCCT GCCGTCCGAC
TACTTCGCGA TCGGCAACCG CTACTCGGTG CGAGGCTTCG ATGAGCAACT GACGCTGGCT
GCCGAGAACG GCGCGCTCAT GCGCAATGAC GTCGCCTGGT CAATCGGCAA CACCGGACAC
GAGGGCTTCG TCGGCTTCGA CATGGGCCAT GTCAGCGGCC CGTCGGCAGC GTTCCTGGTC
GGCCAGACCC TGATGGGAGC CGTGATTGGA GCGCGCGGGC GCTGGCGCTT GGGGCACTGG
GCGGCGCTCT CCTACGAGGT CACGCTCGGC ACGCCGGTCA GGAAGCCGGA CAACTTCCGC
ACCCATCGCA CCAACATTGC GGCCCAACTT GGACTGGAGG TCTGA
 
Protein sequence
MSSILSNARR KARGVFPFAP FALALPSLVA AQALPFFPNV TPNDAIKQRQ EQQDAAKQRA 
MARPDVLSRA ASGPTSGPLI LPTESPCFPI KAVVWDDAQA FGWLTPESEI LVGQCAGTKG
LQAIRDYFAT RLVNEGFVTT RVLIPGQNLS TGTLRLQAVA GRIEHVKSDD TIGRWRTALP
TGAGGLVNQR DLDQGMENIR RLQGQADATI DLVPGDEPGE ADLVVKPGTG KRWHGLITAD
NAGLQNTGKY QMGGTLTVDS PLFLYDSLTI SGNTNANVGN GAAGTRSSAI NYSVPFGYWN
AFFNANQSRY KQTVAGFEDD IVYGGRSAQV EAGVGYVPFR NASGKTSVYG KVFRKSASSS
INGLDLSVQH RDFVGFEVGA SHRQYFGNSV FDIGAAWRQS LPDHSKAPGF VLGQPDWDGK
SEILQGNLGL MVPFQVSGQR LRYQGSVRLQ YSPTRILPSD YFAIGNRYSV RGFDEQLTLA
AENGALMRND VAWSIGNTGH EGFVGFDMGH VSGPSAAFLV GQTLMGAVIG ARGRWRLGHW
AALSYEVTLG TPVRKPDNFR THRTNIAAQL GLEV