| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4435 |
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| Symbol | |
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| ID | 5541948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5704362 |
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| End bp | 5704988 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896533 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_001434469 |
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| Protein GI | 156744340 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.612375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACA CTCTGCAATT GACAGTAGAT GACCTTTCAA TCGAGTATGG CGCGCGGCGA
GTACTGGCGG GCGTGTCGTT CGAGTTGCGC ACCGGTGAGA CCCTCGTCGT CGCCGGCGCA
AATGGGAGCG GCAAAAGTTC GCTCCTGCGC GTGATCTGCG GGTTGCAGCG CCCGGCGCGC
GGGACGGTGA CGATCCGAAT GGACGACGCC GTCTTTCGCC CGGCGGAGGC GCTGCACCTT
CTTGGTTGGG TTGCGCCCGA TCTGCACCTC TACCGTGAGT TGACCGCGCT GGAGAACCTG
GCATTTTTCG CCGCCGTGCG CGGCATTCGT TGCACCCGCG CCGAGCTGGA AGCGTTTCTC
GATGAAGTCG GATTGAGCGG ACGCGGCGAT GATCTGCTGG CGGCGTATTC GTCGGGCATG
ACGCAGCGAC TGCGCTATGC CTATGCGCTG CTGCACCGTC CGCGTCTCCT GGCGCTCGAT
GAGCCAACGG TCACCTTCGA TGCGCGCGGC GTGGCGCTGG TTGAGCAGGT GATCGCCCGG
CAGCGCAAAC GCGGTATAAC GGTCATCGCC ACCAACGACC CACGCGAAGA GCGGTTTGGC
GATTATATCT TGCGGTTGGG GCAATAG
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| Protein sequence | MSDTLQLTVD DLSIEYGARR VLAGVSFELR TGETLVVAGA NGSGKSSLLR VICGLQRPAR
GTVTIRMDDA VFRPAEALHL LGWVAPDLHL YRELTALENL AFFAAVRGIR CTRAELEAFL
DEVGLSGRGD DLLAAYSSGM TQRLRYAYAL LHRPRLLALD EPTVTFDARG VALVEQVIAR
QRKRGITVIA TNDPREERFG DYILRLGQ
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