Gene Rcas_4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4431 
Symbol 
ID5541944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5699971 
End bp5700858 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID640896529 
Productmethyltransferase type 11 
Protein accessionYP_001434465 
Protein GI156744336 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA TCGCTAGAAA TCGGTCACAG GTCGGGTTGA CCTACTTTGA ACGTGTGCTG 
GAACGGCGGC GCGCCGCCGA TCCGGTGGCG CTCACTGCCT TTGGTCGGCA TGTTCATTTT
GGGTTCTGGG AAGAACCGGC GCGCGCCGAT GGTTCGATTG CCGATTTCGT GCGCGCCGCC
GATGCGCTGA CCCTGCGGAT CATCAGAGCG GGCAACGTGC GCTCCGGTCA CCGCGTGCTC
GATGTCGGCT GCGGCCTCGG CGGCACGCTG GCGTTGCTCA ATGAATCCTT CGATCAGGTC
GAGCTGCTGG GACTGAACAT CGATCCGTCG CAGATCGAGC AGGCGCGCTA CATCGCCTGT
GCCCGCCCCG GCAATCTGGT CGATTTTTCG ATAGGCGACG CGATGCGCCT GCCCTACGCC
GATGAGTCGT TTGACACGGT GCTGGCGGTT GAGTGCAGTT TTCACTTTCC CAATCGCGAG
CGATTTCTCC GCGAAGCGTA TCGGGTGTTG CGCCCTGGCG GACGCCTGGC GCTCTCCGAT
TTTGTGCCAA CCTGGCTGAT GCGCACCGCT CTCTGGATGC TCGGCGGATC CATCGAGCGA
ATCATCGAGC CGAGTTTTGG ACCGTTCGAC TTGAGTTACA CACTTGGCGT CTACCGGCGC
ACGGCGCGTC GCATCGGACT GCAACCGGTC GTGATTGACG ATATTACGCG CGGTCTGCTG
CCAACCTTTC CCGTCTGGCG GAAACTGATC CGTTACCTGC TGCCGGATCA CTATGGTATG
GCGGAACTCT TTACTGCCTT TGGCTGGCTG CACCGCCTGC GCCTGATGCG CTATATGGTG
CTTGCATTCG AGAAAACAGC GCACGAGAAA GCGAGCGGAA CGACATGA
 
Protein sequence
MKTIARNRSQ VGLTYFERVL ERRRAADPVA LTAFGRHVHF GFWEEPARAD GSIADFVRAA 
DALTLRIIRA GNVRSGHRVL DVGCGLGGTL ALLNESFDQV ELLGLNIDPS QIEQARYIAC
ARPGNLVDFS IGDAMRLPYA DESFDTVLAV ECSFHFPNRE RFLREAYRVL RPGGRLALSD
FVPTWLMRTA LWMLGGSIER IIEPSFGPFD LSYTLGVYRR TARRIGLQPV VIDDITRGLL
PTFPVWRKLI RYLLPDHYGM AELFTAFGWL HRLRLMRYMV LAFEKTAHEK ASGTT