| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4394 |
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| Symbol | |
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| ID | 5541907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5647624 |
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| End bp | 5648370 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640896494 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001434430 |
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| Protein GI | 156744301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.528228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.180351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC TGCTGTATGG CCGCAATGCG GTGCGCGAGG CGTTGCGCGC CCGGCGACGC
GCTTTTCAGC GCCTGCTCGT TTCGGCTGGT GCGCAGGAGA CCGGCGCCCT TGGTGAGATT
GTGCGCCTTG CCGGTGAGAT CGGCGTGCCG GTTGAACGGA TCGACCGGCG TGAACTCGAC
CGCCGCCTGC TCGATGCGAA CCATCAGGGC GTGGCGCTCG AGTGCGGCGA TTATCCCTAC
GTCGATCTTG ATGATTGTCT GACGCTTGCA GAAGAACGAA ACGAACCGGC GCTCCTCCTC
ATGCTCGACC ATATTCAGGA TCCGCAAAAT GTCGGGACGC TCCTGCGCAC GGCAGAGGTC
GTCGGGGTGC ATGGCGTCAT CATCCCTGGT AGACGCGCAG CGGAGATCAC GCCGGCCGTC
GTGAATGCTT CGGCGGGCGC CGTTGAACAC TTGCGGATTG TCGTTGTCAG CAATCTTGCG
GCGACGATTG AACGGGTGCA GCACGCCGGT GTGTGGGTTG TGGGGGTCGA GGACGACGAA
CGCGCGCGGG TGTTCGATGA GGTCGATCTC GACCTGCCGC TGACACTGGT GCTCGGCGCA
GAGGGATCGG GGCTTGCGCG CCTGACGCGC GAACGTTGCG ATTTTCTCGT GCGTTTGCCG
ATGCGCGGGC GGATTGCGTC GCTGAATGTG GCGGTCGCCG GGAGTATTGT GCTCTACCAT
GCGTGGCGGG TGAGAGTACG GGGTTAG
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| Protein sequence | MADLLYGRNA VREALRARRR AFQRLLVSAG AQETGALGEI VRLAGEIGVP VERIDRRELD
RRLLDANHQG VALECGDYPY VDLDDCLTLA EERNEPALLL MLDHIQDPQN VGTLLRTAEV
VGVHGVIIPG RRAAEITPAV VNASAGAVEH LRIVVVSNLA ATIERVQHAG VWVVGVEDDE
RARVFDEVDL DLPLTLVLGA EGSGLARLTR ERCDFLVRLP MRGRIASLNV AVAGSIVLYH
AWRVRVRG
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