| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4318 |
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| Symbol | rplJ |
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| ID | 5541829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5568930 |
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| End bp | 5569493 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896422 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001434360 |
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| Protein GI | 156744231 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.561909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCAACCC AACGTAAGAT CGAAACTGTC GCCGACCTGA AGCAACGTCT TGAGCGTATG
CAGGTAGCCG TTGTGGCCGA CTACCGCGGT CTCTCGGTTG CCGATATGAC CGACCTGCGT
AAAAAATTGC GCGAAAGCGG CGCGGAATTT GTGGTGGCGA AGAATACATT AACGCGGATC
GCCGCGCGTG AGACGGGTCA CGAGGCGATT GAGCCGCTGC TCGAAGGACC GACGGCTCTG
GCGTTTGCCT ATGACGATGT GCCAAAGTTC GTCAGGGCGA TCAATGAGTT CAACCGCGGT
CCGAAGAAAA TTACAGTGCG TGGCGGATTG CTTGGCACAA CGCTCCTCAA AGAGAATGTG
CTCGATGTCG TTGCCACGCT GCCAACGAAG GACGAAGTGC GGGCGCAGGT GCTCGGCGGA
CTGGCAGCGC CGGTCACCGG ACTGGCAGGC ATCATTGCCG CGCCGGTCAA CGATATTGTT
AATCTGCTCG ATGCCACGTC GAAGAGCATT CTCTATGCGC TTCAGGCACG CGTCGATCAG
TTGCAGCCGT CGTCAACATC GTAA
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| Protein sequence | MPTQRKIETV ADLKQRLERM QVAVVADYRG LSVADMTDLR KKLRESGAEF VVAKNTLTRI
AARETGHEAI EPLLEGPTAL AFAYDDVPKF VRAINEFNRG PKKITVRGGL LGTTLLKENV
LDVVATLPTK DEVRAQVLGG LAAPVTGLAG IIAAPVNDIV NLLDATSKSI LYALQARVDQ
LQPSSTS
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