Gene Rcas_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4309 
Symbol 
ID5541820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5561179 
End bp5562081 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content62% 
IMG OID640896415 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001434353 
Protein GI156744224 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAC TTCCATTCCG CAAGCCGGGG CGCTTCTACC GTGGTAATCT GCACACCCAT 
TCCACCGTCT CCGACGGTGA ATTGTCGCCG GAGGACGTTG TCGCCGCCTA TCGCGTGCAG
GGGTACGATT TTCTGGCGCT GACCGACCAT TTTCTGCCGC AGTACCATTT TCAGATCACC
GATACCCGCC CGTTTCGCAG CGCGCACTTC ACCACGCTCC TCGGCGCAGA ATTGCACGCC
CCACAGACAT CTGCCGGTCG GTTGTGGCAC ATTGTTGCGG TTGGACTGCC ACTCGACTTT
GAACCGACCG CGCCGGACGA GACCGGACCG ACGCTCGCAG CCCGCGCTGC CGCCGCCGGC
GCCTTCGTCG GCATTGCGCA TCCCGCCTGG TATACGTTGA CCCTCGACGA TGGGTTGTCC
CTCGACGCCG CGCACGCCGT CGAGGTGTTC AATGCAACCG CCGCCTGGGA TAATGATCGC
GGCGATAGCT GGCATTTCAG CGATATGCTG CTGGCAAACG GGAAGCGGTT GCTGGCATAT
GCCGCCGATG ATGCGCATTT CTCCATTCGT CCCGATACAT TCGTGGCATG GGTGCAGGTG
CGCGCGGGGG AACTATCCCC CGAAGCGCTT CTGGATGCGC TGAAGAGTGG TGCGTTCTAT
TCCTCCCAGG GACCGCAGAT CGACGATGTG GATATCGATG ATCGACGGGT TGCGGTGCGC
TGTTCCCCGG CGCGCGCCGT GTTCGTCTCT GGTCCTGACG AGCGCTCACA GCGTCAGTTG
GGGCAGGCGA TCACAGTGTG TGAACTGCCC ATCCCATGGA TCCACGAGGT TCCATACATC
CGGGTGACGG TGGTGGATGA TGCCGGACGA AAGGCATGGA CTAATCCCAT CTGGCTGGGC
TGA
 
Protein sequence
MDQLPFRKPG RFYRGNLHTH STVSDGELSP EDVVAAYRVQ GYDFLALTDH FLPQYHFQIT 
DTRPFRSAHF TTLLGAELHA PQTSAGRLWH IVAVGLPLDF EPTAPDETGP TLAARAAAAG
AFVGIAHPAW YTLTLDDGLS LDAAHAVEVF NATAAWDNDR GDSWHFSDML LANGKRLLAY
AADDAHFSIR PDTFVAWVQV RAGELSPEAL LDALKSGAFY SSQGPQIDDV DIDDRRVAVR
CSPARAVFVS GPDERSQRQL GQAITVCELP IPWIHEVPYI RVTVVDDAGR KAWTNPIWLG