Gene Rcas_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4302 
Symbol 
ID5541813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5550274 
End bp5550648 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content56% 
IMG OID640896408 
Productresponse regulator receiver protein 
Protein accessionYP_001434346 
Protein GI156744217 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA TTCTGGTTGC GGACGATTTT CTCGAGAATC GTGATATTTT GTGCCGAATG 
CTGGAACTCG TCGGACATCG AACGGTCAGC GCCGCCAATG GACAAGAGGC TCTCGATCTG
GCGCAGACAT ATCATCCCGA TGTTATTCTG ATGGATCTCT CAATGCCGGT GCTGGACGGA
TGGGAAGCAA CAGCCCGGCT CAAGGCGCTC GACAGTTTAC GCCACGTGCC GGTGCTTGCC
GTCACGGGCC ACGTGACGCC GCACGAGATT CAGCGTGCTA TCGAAGCGGG GTGCGTCGAT
TACATTGCGA AGCCGATCGA CTTCGATCTC CTGATCGGGA AAGTGACGTC GTTACTGAAC
GACGGAAAGG GTTGA
 
Protein sequence
MATILVADDF LENRDILCRM LELVGHRTVS AANGQEALDL AQTYHPDVIL MDLSMPVLDG 
WEATARLKAL DSLRHVPVLA VTGHVTPHEI QRAIEAGCVD YIAKPIDFDL LIGKVTSLLN
DGKG