Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4102 |
Symbol | |
ID | 5541613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5315577 |
End bp | 5317127 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896214 |
Product | carboxyl transferase |
Protein accession | YP_001434152 |
Protein GI | 156744023 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.09097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.079173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA CACGTGAGCG CATTGAGGAT TTGCGCCGGC GGCGTGAGCG CGCACGCACG ACGGATCCGC AGGCGGCAGA GAAGCAGCAC GCGCGCGGCA AGATGACTGC CCGCGAACGT ATTGAAAAAT TGCTCGATCC GGGTTCCTTC GTTGAACTCG ACGCCTTTGC CGTTCATCGC ACCACTGCGT TTGGCATGGA TCGGCACAAG CCGCTTGGCG ACGGCGTAAT TACCGGGTAT GGCGCCATCG ACGGTCGCCA TGTTTGCCTC TTCTCCCAGG ATTTTACCGT GTTTGGCGGA TCGCTTGGCG AGGTGTTCGC CGAGAAGATC TGCAAAGTCA TGGACCTGTC GTTGCGGATG GGTGTGCCAT GTATCGGCTT GAACGACTCC GGCGGCGCGC GCATCCAGGA AGGGGTCGTC AGTCTTGGCG GGTACGCCGA GATTTTCTAC CGCAATGTGA TGGCGTCGGG CGTGGTTCCT CAACTGTCGG TGATTGCCGG ACCATGCGCC GGTGGTGCGG TCTATTCACC TGCGATGACC GACTTCATCC TCATGGTCAA GGGAAGTTCG CAAATGTTTA TCACTGGTCC CGACGTGATC AAAACCGTCA CCGGCGAGGA TGTCGGCTTT GAGGAGTTGG GCGGGGCGAT GACGCACAAC TCGCGCAGCG GTGTGGCGCA TTTTGCCGCC GACAGCGAAG AAGAAGCCTT CGATCAGGTG CGGGCGCTGC TTTCGTTCCT GCCGTCAAAC AATCTGGAAG ACCCGCCATT CGTTCCTACT GATGATGACC CTGATCGTAT GGACGAGAGT CTGCAAACGA TCATTCCCGA TAATCCGCGC AAACCCTACG ATATGCTTCA GGTCATCGAG GCGGTTGTGG ACGAAGGCAG TTTTCTCGAA GTGCAGCCGT TCTGGGCGCG GAACATCATT ATCGGGTTTG CGCGCCTCGA CGGGCACGCA GTCGGGGTGG TCGCCAATCA ACCGGCGCAC CTGGCGGGCA CGCTCGACAT CGACTCATCG GTCAAGGCGG CGCGGTTTGT GCGCTTCTGC GACGCCTTCA ATATTCCGCT GATTACATTT GTTGATGTGC CCGGCTTTCT TCCTGGAACT CAACAGGAAT ATGGCGGCAT TATCCGGCAT GGCGCCAAAC TGCTGTATGC CTACTGTGAA GCGACCGTGC CGAAGCTCAC GGTCATTACG CGCAAAGCCT ATGGTGGCGC CTACGACGTG ATGGCGAGCA AGCACATTCG CGCGGATTTC AATGTTGCCT GGCCCACTGC CGAAATTGCC GTGATGGGCG CCGATGCCGC CGTCAAGATC ATCTTCCGCC GCGAACTCGC GCAGGCAGCC GATCCGGTAA CGCGCCTGGC GGAACTGGTC GAGGATTACC AGAACCGATT CGCCAACCCC TATATCGCGG CTGAACGCGG ATACCTCGAC GATGTGATCG AGCCGCGCGA GACGCGACCG GTTCTGATCC GCGCATTGCG CCTGGCGCGC GGGAAACGTC AGACCCTGCC GCCGCGCAAG CATGGGAATA TACCGCTGTA A
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Protein sequence | MKTTRERIED LRRRRERART TDPQAAEKQH ARGKMTARER IEKLLDPGSF VELDAFAVHR TTAFGMDRHK PLGDGVITGY GAIDGRHVCL FSQDFTVFGG SLGEVFAEKI CKVMDLSLRM GVPCIGLNDS GGARIQEGVV SLGGYAEIFY RNVMASGVVP QLSVIAGPCA GGAVYSPAMT DFILMVKGSS QMFITGPDVI KTVTGEDVGF EELGGAMTHN SRSGVAHFAA DSEEEAFDQV RALLSFLPSN NLEDPPFVPT DDDPDRMDES LQTIIPDNPR KPYDMLQVIE AVVDEGSFLE VQPFWARNII IGFARLDGHA VGVVANQPAH LAGTLDIDSS VKAARFVRFC DAFNIPLITF VDVPGFLPGT QQEYGGIIRH GAKLLYAYCE ATVPKLTVIT RKAYGGAYDV MASKHIRADF NVAWPTAEIA VMGADAAVKI IFRRELAQAA DPVTRLAELV EDYQNRFANP YIAAERGYLD DVIEPRETRP VLIRALRLAR GKRQTLPPRK HGNIPL
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