| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4066 |
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| Symbol | |
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| ID | 5541577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5277082 |
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| End bp | 5279229 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896178 |
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| Product | hypothetical protein |
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| Protein accession | YP_001434116 |
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| Protein GI | 156743987 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.174208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCA TTACGCAACA CACACCAAGA GTTGCTGTAT TCCCACACCT AATTGCCCTG
GCGCTCTATA CCCTGCTTGG CATTCTCCTG ACGTGGCCCT TACTGCTAAA CCTGACAAAT
GGCGTCATCG GCGCTGTTGA CGGCGTCGAT GCTTATCAAA ACGCCTGGAG TCTATGGTGG
ACGGCGCAGG CGCTGACCTC GCTGCGCAAC CCTTTCTTTT CGCCGCTCCT CTTCTACCCC
GATGGCGTCG ACCTCTTTTG GCAGCCGCTT GGGTTCAGCC AGGGAGTGCT GGCGCTGCCG
GTGACGCTTA CGCTGGGACC GGTCGCTGCG GTCAACTGGA TTGTGCTCAC CAGTTTTACC
GTTGGCGGAT ATGCAACCTT TCTGCTAGCG CGGCGCGTGA CCGGCAATGC AGCGGCAGCG
CTGGTGGCGG GCGCCACCTT TATCTGTTCG CCCTATCACA TGGAAAAGGT GATTGATGGC
AACCTGGAAG TGGCTGCCAT TCACTGGCTT CCGTGCTATG CCTATGCCCT CTTGGCGCTG
CTCGACCGTC CATCATGGCG TCGGGCGCTG GCGGCTGGCG CTCTGCTCGT CTGGGTCAGC
CTGGGCAGCT GGTATTACGG GCTATTCGCC GTGCTCTTCA CGGCGTGCGC TGCCGGTATC
TGGGCATACG GCGCCACCCG CAATGCAGAG CGCATGCATC AGTTGCAGCG CGGCTTACAG
CAGGCGATGT GGGGAGTAGC CCCCTTAGTC ATTTTGGTGA TGGCGATTGC ACCGGCGTTG
TATAGTCTGG TGACAACCGG AGCGGACGAG ATGCTGTGGG ATATGCGCTC GATACAGCGT
GAGCGCTCTG CCGATTTAAT AGATGCATTT CTGCCCAATC CGGTCCATCC TGTGTGGGGT
CCGGCGGTGC GCGCCTGGCG TAACCAGATC TATCCCAACG CGGTGATCTG GAATGTGTCG
CTGGGGTGGA TCGCGCTCGG ACTCGGACTG TTGGGCGCTA CTACTGCGTG GCGTGCCACG
TGGCGCTGGT CGCTGCTGGC GCTGGCATGC TTCATTGTCG CCCTTGGACC GGAGTTGAAG
ATCGCAGGCT GGCACACCGG TCTTCCACTG CCGTATACTC TCATCCAGGA TATGCCCGTC
ATTCGCTCAG GGCAGCGACC GAACCATATG ATGGTAATGG TCAGTCTGAG CCTCTCGATC
CTTGCGGCAT ACGGCTTTAC CGTGTTGCAA CAACATCTCA TACAACACCC CTCGCCAATC
CATATGTGGA GTATGGCGCT TGCATTGATC GTACCGGTTG CTGGTATTGA CGGATACGCC
GGGACCCACA CCATCGTCGC GCGCCGCATC CATCCATTCT ACGCCACATT GCCGCCTCCC
GACGGAGCAA TCATAGCGTT GCCGCTCTAT CTTAACGTCA ACCGTAGCGA GAACCTGACG
GCACAGATAG GTCATGGATG GCCCATCATC GGCGGGTATG TCGCCCGTCC GCCTGCATAC
GTATTTCCGA AGTATACCCC TGGTGTCCGT GAGATACAGT TTGGTGAAGT CGAAAGACAG
GACGTCGTAT CGCCTGGATG GCCCGAATCT GCCCGGCGAG CGCTGGCGGC GTACCGCATT
CGCTACATCA CCATGGACTT GCAAAGCAAT AAAGACGAGT ATTTTGCGCG CCTCCGCCCG
CTCCTCGCTG AGTTGGGGAT CGAGACGCCA GTCTTCGTTG ATGAGACGCT GGAAGTTTAC
GCTGTACCGC AAGCCTGGCG GGTCGTGCCG GTGGCGTTTC TGGGCGACGG GTGGCAACCG
CTTGAACGCG AACCGGCAAC CGGCGTTCGC TGGCGCTGGA TGGGCGAGCG CGCCGAAGTG
CGGCTGTTCA ATCCCCTCGT CGGCGCGGCG TTGGTGCGCC TGACTTTCTG GATGGAGGCG
TACTATGAGA CGCGACCACT CTGGTACACG CTCAACAATA TGGCGCTGGG AACAGTCACC
GTTCCTTCCG GGCGCGCGCC AGCGCGCGCA ATCTACGTGC TGCTTCCGCC CGGCGACCAT
GTGCTGACCT TGCAGGCGCC CGCTGATCCT GACCCGGCGC GCGCTGGCGC GCCGATCAGC
ATCCGTCTGT TTGCGCTCGA TGTCCGCAGC GCTGCCGGCG CGCCATAG
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| Protein sequence | MASITQHTPR VAVFPHLIAL ALYTLLGILL TWPLLLNLTN GVIGAVDGVD AYQNAWSLWW
TAQALTSLRN PFFSPLLFYP DGVDLFWQPL GFSQGVLALP VTLTLGPVAA VNWIVLTSFT
VGGYATFLLA RRVTGNAAAA LVAGATFICS PYHMEKVIDG NLEVAAIHWL PCYAYALLAL
LDRPSWRRAL AAGALLVWVS LGSWYYGLFA VLFTACAAGI WAYGATRNAE RMHQLQRGLQ
QAMWGVAPLV ILVMAIAPAL YSLVTTGADE MLWDMRSIQR ERSADLIDAF LPNPVHPVWG
PAVRAWRNQI YPNAVIWNVS LGWIALGLGL LGATTAWRAT WRWSLLALAC FIVALGPELK
IAGWHTGLPL PYTLIQDMPV IRSGQRPNHM MVMVSLSLSI LAAYGFTVLQ QHLIQHPSPI
HMWSMALALI VPVAGIDGYA GTHTIVARRI HPFYATLPPP DGAIIALPLY LNVNRSENLT
AQIGHGWPII GGYVARPPAY VFPKYTPGVR EIQFGEVERQ DVVSPGWPES ARRALAAYRI
RYITMDLQSN KDEYFARLRP LLAELGIETP VFVDETLEVY AVPQAWRVVP VAFLGDGWQP
LEREPATGVR WRWMGERAEV RLFNPLVGAA LVRLTFWMEA YYETRPLWYT LNNMALGTVT
VPSGRAPARA IYVLLPPGDH VLTLQAPADP DPARAGAPIS IRLFALDVRS AAGAP
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