Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4032 |
Symbol | |
ID | 5541542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5230790 |
End bp | 5231704 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640896144 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001434083 |
Protein GI | 156743954 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000393605 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000152914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGGGAAC TTATTATCAT CGGCGGCGGT GCAGCGGCGC TTTCTGCCGG GATGTATGCG CTGGGCAAGC AGATCGATTT CGTGATGATC TATGAATCGT TGGGCGGCAA AGCCGGTTGG CGGCAGAGCC TGGTTGGGCA GGAGGAGGTC GAATATCTGG CGGGCGAAGA AGCAGTCCGT ATCTTCGAGC GCAAGATCGC CATGCAGTCG GATCGCGCGA TCCGTGATAC CGTCACGGCG GTGCATCGCG CAGACCAGGG GTTTCGCGTC GAGACGCGCA ACCACGGCGC TCTCGATGCG CTTGCCGTGA TTGTTGCCAC CGGCGCGACG CCGGTGCGCC TCAAAGCGCC GGGCGCCCAG GAGTTGCTCG GTCAGGGGCT GGGCTACTCG GTCACCACCC ATGCGCACCT GCTGGCGGGG AAGACGGCGG CGGTCGTGGG GGCGACGCAT CGGGCGCTGC GCGGGGTGGC CGAACTGGCG CGCACGGCCG AAAAGGTCTA CCTGATCGTC CCTGAACTGC ACGATGTCTC ACTGCCGATG ATGCATGCCG TCAGCCAGCG CCCGAATGTG GAAATCCTGG CAGGGTACAC CGTCGATGAA GTCGTCGGCC CGATGAATGT CGAGGAGATT GTTGTCTCGC GCGCGGGAGA ACAGCGTCGG ATCGCCGTCG ATGCGGCGTT CGTCGATCTG GGGTTGCGCC CGTGCAGTGA GATCGTGCAG CACCTGGTGC GCACCGATCA GGACGGCTTC ATCTGGGTCG ATGAGCGCAT GGCGACGACG GTTCCGGGTG TTTTCGCCGC CGGCGATGTG ACGACGGCGT TTGGTGAACA GGTGCTGATC GCCATCGGCG ATGGAGCGCG CGCGGCGCTC AGCGCCTACG ACTATCTGCT TATGCGAATG CCGGTTGCGC GGTAA
|
Protein sequence | MRELIIIGGG AAALSAGMYA LGKQIDFVMI YESLGGKAGW RQSLVGQEEV EYLAGEEAVR IFERKIAMQS DRAIRDTVTA VHRADQGFRV ETRNHGALDA LAVIVATGAT PVRLKAPGAQ ELLGQGLGYS VTTHAHLLAG KTAAVVGATH RALRGVAELA RTAEKVYLIV PELHDVSLPM MHAVSQRPNV EILAGYTVDE VVGPMNVEEI VVSRAGEQRR IAVDAAFVDL GLRPCSEIVQ HLVRTDQDGF IWVDERMATT VPGVFAAGDV TTAFGEQVLI AIGDGARAAL SAYDYLLMRM PVAR
|
| |