Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3892 |
Symbol | |
ID | 5541398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5095727 |
End bp | 5096953 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896003 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001433946 |
Protein GI | 156743817 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTATTC TTATTATTGG TCTTGGCGGG ATCAGCCGCC ATTTTCGCAA CTGGCCCGAA CGAACCCTGG GACAATCGCT GGTGCGCGCC GGCCACGAGG TCTATGCACT GACATACTGG CAACCTGACG CGCCGCACCT CGGTCTCGTC GAGCGCGCCG ACACCATCGA TGGTGTGCGC GTCATCCGTG TGCGCCCGCG CATCGTGCCA AACCGCGATC TTGTGTCTGT TCTGCGCAGC ATCCCACGCC CGGATGTCGT TCACCTGATG CATCCGCGCA ATGTTCTGGC GTGGGAAACC GTGCGCCGGA TGCGGCAGAG TCGTGTGCCG ATCTGCTGGA CATGGCTGGG ACCATTTCAT GATCGCTGGC TGGTGGACGA CCGCGAGCGT CCCTATGAAC GACCGCCACA TCCTGAGCGC CTGATCATGA GCGCACTCGA CCTGGTGCGT CGTGTGATGC GTGAACCATG GCGTGCGCGC GATCACTGGC GAAACTATGC GATCCATGCG CCATTGCGAC AGGTCAACCG CTTCATTCCC TGTTCACGCC ACGAAGCCGA TGTCCTGACC AACCTCGGCT TCGGGAACCG AATGGGACCG ATTGTGCCGC TCTGGATCGA TATGGAGTTC ATGAACGGAC CTGCTCCGGC ACCCCCGCCG CTAACCCGCC CGATCATTCC ATACATTGGT CAGTTAACCG TCCGCAAATG CTATGACATG ATCATCGATG TTATGTCGGT GATTGTCCGC CACTATCCGC AGGCATCCTT CGTCTTCGTA ACGCACAACC AGGCACAGCG CGCCGATCTG ATGCGTCGCG CCGCTCAACA GGGCATCGAA CACAACCTGC ATTTCCTCGG TACAATCAGC GAAGAAGAGA AACTGGCGTT GCTGCGCGCC AGTGATTTGC TTCCTTTTCC CTCGCGCTAC GAGGGCTTCG GGTTGCCGCT CCTCGAAGGT ATGGCTGCCG GAGTGCCCGT GATCTCGACC AATATTCCGG TGGTTAATGA AATTGTGATT CACGGTGAGA ACGGGTTGCT CATCCCCTAC GACGACACCC ATGCACTGGC GCAGGCAATG TTGACCCTGC TCGAAGATCA GGAGATGCGC AAACGCCTGA TCGCTGGCGG CAAACGCGCA TTGCATGAGC GCTTCGCACC AGAGCGCCTG GTTCGTCAGG TCATTGCGGT GTACGAAGAA GTCATTAGTG CATATGCCTC ATCCTGA
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Protein sequence | MRILIIGLGG ISRHFRNWPE RTLGQSLVRA GHEVYALTYW QPDAPHLGLV ERADTIDGVR VIRVRPRIVP NRDLVSVLRS IPRPDVVHLM HPRNVLAWET VRRMRQSRVP ICWTWLGPFH DRWLVDDRER PYERPPHPER LIMSALDLVR RVMREPWRAR DHWRNYAIHA PLRQVNRFIP CSRHEADVLT NLGFGNRMGP IVPLWIDMEF MNGPAPAPPP LTRPIIPYIG QLTVRKCYDM IIDVMSVIVR HYPQASFVFV THNQAQRADL MRRAAQQGIE HNLHFLGTIS EEEKLALLRA SDLLPFPSRY EGFGLPLLEG MAAGVPVIST NIPVVNEIVI HGENGLLIPY DDTHALAQAM LTLLEDQEMR KRLIAGGKRA LHERFAPERL VRQVIAVYEE VISAYASS
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