| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3799 |
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| Symbol | |
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| ID | 5541301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4970658 |
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| End bp | 4971533 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895909 |
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| Product | NifU domain-containing protein |
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| Protein accession | YP_001433856 |
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| Protein GI | 156743727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CACTCAACGG CCACGATACT GCCATCGACG CACTGGAGCG GCTGGCGCTG
CGTATCGAGC AGGCAATAGC GGCGGTGGGC AAACTGGATG ATCAGGCGCG TGAGTGTGCG
CTCGAACTGC AACGCGCCAT TGAAACCTTC CACAAAGAGG CGCTCACCCG CATCGTGCGC
CGCCTGAAGG ACGATCCGCG CGGCAAAGAA CTCCTCTTCG ATCTGGTCGA TGATCCGCTC
ATCTATACGC TCTTCGCGCG CCACGAGATC GTGCGCCCGA ACATCGTCGC GCGCGTCTCG
CGTGTGCTCG ACGCAGCGCG CCCCTACATC CGCTCGCACG GCGGCGATGT CGAACTTGTC
GAAGTGCGCG AGAATGTGGT CTACGTCCGG CTCCACGGCA GTTGCAACGG ATGTTCGCTC
TCGGCGGTGA CGCTGCGCAA CGAAATCGAA GCCGCGCTGC GCGCCAATGT GCCCGAAATT
GTCGGTGTGC AGGTGGTCGC CGCCGGCGCG GTCCCGGCGC TGATCATGCC TGAAAGCATC
GGCGTGCGTG ACCCGCTCGC CGGATGGGTC GCCGGTCCGC CGGCGAGCGA TGTGCCTCCC
GGCGCAATGC GCCGTCTGGA AACCGATCAT GCGGACATTC TGATTATCAA TCTCGACGGA
CGGTTGAGCG CCTTTCGCAA TGCCTGTGCG CATCAAGGGC TGCCGCTCAA CGGCGGGTTG
CTCGATCCCG AAAGTGGCAC ACTTACCTGC CCATGGCACG GTTTCTGCTA CGACGCCAGC
AGCGGCGAAT GCCTGACTGT GCCGCAAGCG CAATTGGAGC CGTTCCCGCT GCGCGTCGAA
CAGGGACGCA TCTGGGTGCG CCCGACGCAG GGATAG
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| Protein sequence | MTTPLNGHDT AIDALERLAL RIEQAIAAVG KLDDQARECA LELQRAIETF HKEALTRIVR
RLKDDPRGKE LLFDLVDDPL IYTLFARHEI VRPNIVARVS RVLDAARPYI RSHGGDVELV
EVRENVVYVR LHGSCNGCSL SAVTLRNEIE AALRANVPEI VGVQVVAAGA VPALIMPESI
GVRDPLAGWV AGPPASDVPP GAMRRLETDH ADILIINLDG RLSAFRNACA HQGLPLNGGL
LDPESGTLTC PWHGFCYDAS SGECLTVPQA QLEPFPLRVE QGRIWVRPTQ G
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