Gene Rcas_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3783 
Symbol 
ID5541285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4955344 
End bp4955772 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content58% 
IMG OID640895893 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001433840 
Protein GI156743711 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAACCA CCGATCAGGA GATTCGCAAT CTCCTCACCG CTGCACGCAC CGTTGCAGTC 
GTTGGCATCA GCGACGATCC CGAACGCGAC TCGTATCTGG TCGCTGAGTT TTTGCAGCGC
CAGGGGTATC GGGTCATTCC GGTGAATCCG CGCCTGGCGA CGCTGAATAT TCAGGTGCTT
GGCGAAAAGG CGTATGCCAC GCTGCGCGAT GTGCCTGAAC CGATCGATAT TGTGGACATC
TTTCGCCGTC CTGAAACGGT GATGCCGGTC GTTGAGGATG CGATTGCCGT TGGCGCCGGC
GCGGTGTGGA TGCAGTTGTC AATCGTGAAT GAGGAAGCCG CAGCGCGCGC CGAAGAAGCA
GGGTTGAAGG TGGTCATGAA TCGCTGCATG GCAGTCGAGC ATCGGCGGTT GATTCCAAAA
CAGGCATAA
 
Protein sequence
MLTTDQEIRN LLTAARTVAV VGISDDPERD SYLVAEFLQR QGYRVIPVNP RLATLNIQVL 
GEKAYATLRD VPEPIDIVDI FRRPETVMPV VEDAIAVGAG AVWMQLSIVN EEAAARAEEA
GLKVVMNRCM AVEHRRLIPK QA