Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3655 |
Symbol | |
ID | 5541157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4783442 |
End bp | 4784386 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640895775 |
Product | hypothetical protein |
Protein accession | YP_001433722 |
Protein GI | 156743593 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.782958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTG ACACCATCCA GATCAGTTCT CCGGTCGAAT CAGACGCCGA TCCGTTCCGC TACGGGTGGC GTTTCGTGCT GCGCCCGACC CCCGACGATC CTCGTCACCT GGAACAGATT CCGCTCACGT TAGAAGATGT CCTGCACCCT GAGGTGGGAG ACTTCATCGT GCACAGCGAC CGTCACGAAA CCGACCGGAT GTACCTCACC GAAGTGCTCC GCGCGCGCCT GGAGCCATCT GGTCTTGCGA TCGTGCTCAG CGATGTGCGC ATTGCATGGG ATGTCCCCAA CCTGCGGGCG CATGGTCCAG ATGTGATGGT TATTCCCGGC ATCCCGGAGC GGCGGAACTG GAGCACGTTT GAGGTGGCGG TCGAGGGTGC GCGTCCGGCG CTGATCATCG AAATCACCTC GCCGGAGACG CGCGAGAACG ATCTGGTGCG CAAGGTGGAG CACTACGCAT GGGCTGGGGT CGCGCAGTAT GTGATCGTCG ACGATATGGG CGGTCGAAGC GGGGAGCGAC GGTTGCGTCT GCTCGACTAT CGATTGGCGG ATGGGCGCTA TGTGGCGCAC TCGACGGAAG CCGACGGGCG GGTGCAGCTG GTCATTGCCG GTCTGTGGCT GGGCATCGAG GGCGATCATG TCGTCTGCTA TGATGAGCAG GGTGTGGCAA TTGGCGACTA CGTCATGGTC GTGCGGCAGG CGGCAGAGGC TGCGGAACGG GCGCGCCAGG AAGCGGCAGC GCGGGCGGAG GCGGAAGCGC GGGCGCGCCA GGAAGCGGCA GCGCGGGCGG AGGCGGAAGC GCGGGCGCGC CAGGAAGCGG CAGCCCGCGC CGAGGCGGAA GCGCGGGCGC GCCAGGAAGC GGCAGCCCGC GCCGAGGCGG AAGCGCGGCT GCGTGCGCTG GAGGCTGAAC TGCGGCGTCT GCGCCGCGAG GAAGATGGAC AATGA
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Protein sequence | MTTDTIQISS PVESDADPFR YGWRFVLRPT PDDPRHLEQI PLTLEDVLHP EVGDFIVHSD RHETDRMYLT EVLRARLEPS GLAIVLSDVR IAWDVPNLRA HGPDVMVIPG IPERRNWSTF EVAVEGARPA LIIEITSPET RENDLVRKVE HYAWAGVAQY VIVDDMGGRS GERRLRLLDY RLADGRYVAH STEADGRVQL VIAGLWLGIE GDHVVCYDEQ GVAIGDYVMV VRQAAEAAER ARQEAAARAE AEARARQEAA ARAEAEARAR QEAAARAEAE ARARQEAAAR AEAEARLRAL EAELRRLRRE EDGQ
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