Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3552 |
Symbol | |
ID | 5541053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4634754 |
End bp | 4635332 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895671 |
Product | hypothetical protein |
Protein accession | YP_001433619 |
Protein GI | 156743490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.333315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTT TGCTCGGCAT CTTATCCGCG TTTGGTCTAT CGACTGCCGC AGGTCTCAAT GCCTATATTC CACTGCTCAC GGTCGGTCTT CTGGCGCGCT ATACCGACCT TATTCACCTC AATGCGCCCT ACGATGTGGT GGAACATCCG GTCTTCCTGC TGGTCGTCGC TGTGCTGACC CTGCTCGATT TCATCGGCGA CAAAATCCCG GCAGTCGATC ACGCACTGCA CCTTGCCGGC ATGATCATAA GCCCGGCGGC TGGTGCGATT GTCTTCCTGG CGGCAAACAG TTCGACCGGC GCCGTTGATC CGGTTTTGGC GGCGATCTGC GGCATCCTGG CGGCTGGCGC AACCCACGTC GGGCGTAGCG CCGTGCGACC GGTTGCAACC GCAACCACCG GCGGCGTGGC GAATCCGGTG GTCAGCGCCA TTGAGGACCT TATCTCGTTA CTGGTGTCGA TCCTGGCTGT GTTGGCGCCG ATCCTGGCAA TCATAACTCT TGCGCTCTTC GCCATTGTCG TCGTGCGATT CATCCGCCGC ATCTGGTCTC CACGACGAAC CGCCTCCTCC CGCCAATGA
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Protein sequence | MTGLLGILSA FGLSTAAGLN AYIPLLTVGL LARYTDLIHL NAPYDVVEHP VFLLVVAVLT LLDFIGDKIP AVDHALHLAG MIISPAAGAI VFLAANSSTG AVDPVLAAIC GILAAGATHV GRSAVRPVAT ATTGGVANPV VSAIEDLISL LVSILAVLAP ILAIITLALF AIVVVRFIRR IWSPRRTASS RQ
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