Gene Rcas_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3527 
Symbol 
ID5541026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4593505 
End bp4595193 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content61% 
IMG OID640895645 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001433595 
Protein GI156743466 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCACG ACCTGACGAT ACACCGCGTC TTGAATGTGA TTCAGCGCGC CACCCAAACG 
GCTTCACAAA CTCACCTGAC TGCGCTGCTC GACCGCACCC TCGATCTGTT TGTTGAAGAA
GCGCATGCCG AAGCCGGAAC GCTCTATCTG TACGACCCGG AACATGATGC GCTCGTCTTT
CACGTTGTCA AGGGTGACGC GGCGAGCCAG CGATTGCTTG GCATGCGCAT TCCGGCGAGC
CGTGGGGTAG CGGGCGCTGC GCTGCGTGCG CGTGAGCCGA TCTTCGTCCA CAATGTTGCC
GAAGACCCGC GTTGGGACCG GAGCATCGGC GAACTGGCAT CACTCCAGTT GCGCACCATG
TACTGCCTGC CGTTGATCAT CGATGATCGA CCGGTTGGTG TGGTGCAGGT CTTCAATCTG
CCCGCTGACG CAATCGATGC CGATGAAGAA CTGATACTGC TCCGCATCCT GGGCAATGTG
ATGGTGAATG TCATCGACAA GACGCGCCTG CTCGATGAGA CCCATCGCCG TGAACGGCGG
CAGCGCGCGC TGGCGGATAT TGCCGCGCGC TTGACAACGA CGCTGGATCG TCAACAGTTA
TTGACCCTGA TCATGGACTA TGCCCGTGAC CTGCTCAACT GCGAGGCGAC GTCGGTATGG
GAAATCGACG ATGAAGACGA GCCGAACCCG GTGCTGCGCT CTCATGTCGC CACCGGATCG
CGCGGCGAAA AAGTCACCGG CGTCACGGTG CCGTTTGGGC AGGGGATCAT CGGGCATGTC
GTTGCGACCG GCGCAATCAT CCGGTTGGAC GATGTGCGCA ACGACGCGCG TCATTACCAG
GGGGTCGATC AGCAGAGCGG CTTTGAGACG CGCTCGATCC TCTGTGTGCC GCTCCACGCG
CCGAGCATCG AACTCGGCGC GGAGCGTGGT CGTGTCGAAG CGCGCATCAT CGGCGGCGCC
CAGGCGCTCA ACAAAATCGG CGGTCCGTTC ACCGATGATG ACGTCGCCTT GTTCGAGGCG
TTTGCCAACC TTGCGGCGAC GGTGTTGCAA CTCTCGCGTC TGTATGCCGA TACGCAAAAC
CTGCTGCTCG GCATGATCAA GGCGCTCGTC GAAGCTGTGG ATGCGCGTGA CCGCAACAAT
CAGCGCCACT CGCGCCGTGT CTCCGATTTT TCGGTTGCTA TCGCGGAAGA ATTGGGGTTG
TCCGATGAGC AAATCTTCCA TGTGCGCCTT GGCAGCCTGC TCCACGACAT CGGGAAGATT
GGCGTGCCGG ACGCGATCCT CGACAAGCCG GGGCGCCTGA CCGACGAAGA ATTGGTCGAG
ATGCGCAGCC ACACGACAAA GGGCTATGAG ATCATGAGCC AGGAGGAACT CAAGCGTCTG
CTGCGCGTCG AATTGCCGGC GCTCTTGCAG CACCACGAAC GGCTCGACGG TAACGGCTAT
CCACACGGCA TCTCCGGCGA CCGGATTTCC TGGATTGCGC GGATTGTTGC CGTCGCCGAT
GTGTTCGATG CGCTGACCAG CACTCGACCG TACAAGGAAC CCTGGAGTGC AGAGCGCGCG
ATTGCGTATC TTACAGAACG CAAGGGGGTC GAGTTCGATG CCGCCTGCGT CGAGGCGCTT
GCGCGCGCGC GCGCAAAGGG GCATCCGCTG GTCAAAACGC AGGTCGAGCG TGCTATGGAA
AGGGGGTGA
 
Protein sequence
MDHDLTIHRV LNVIQRATQT ASQTHLTALL DRTLDLFVEE AHAEAGTLYL YDPEHDALVF 
HVVKGDAASQ RLLGMRIPAS RGVAGAALRA REPIFVHNVA EDPRWDRSIG ELASLQLRTM
YCLPLIIDDR PVGVVQVFNL PADAIDADEE LILLRILGNV MVNVIDKTRL LDETHRRERR
QRALADIAAR LTTTLDRQQL LTLIMDYARD LLNCEATSVW EIDDEDEPNP VLRSHVATGS
RGEKVTGVTV PFGQGIIGHV VATGAIIRLD DVRNDARHYQ GVDQQSGFET RSILCVPLHA
PSIELGAERG RVEARIIGGA QALNKIGGPF TDDDVALFEA FANLAATVLQ LSRLYADTQN
LLLGMIKALV EAVDARDRNN QRHSRRVSDF SVAIAEELGL SDEQIFHVRL GSLLHDIGKI
GVPDAILDKP GRLTDEELVE MRSHTTKGYE IMSQEELKRL LRVELPALLQ HHERLDGNGY
PHGISGDRIS WIARIVAVAD VFDALTSTRP YKEPWSAERA IAYLTERKGV EFDAACVEAL
ARARAKGHPL VKTQVERAME RG