| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3485 |
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| Symbol | |
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| ID | 5540984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4548061 |
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| End bp | 4548480 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895603 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433553 |
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| Protein GI | 156743424 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.666502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCAT ACCGTGAGGA ACTCTGGTTC AACACCCCCA CACGGGTAGC GTTTGTGCGC
ATTACCGATC AGGTCGCGGC AGCCGTGCGC AAATCGGGAG TGCGTGAGGG ATTGTGCCTG
GTTAACGCCA TGCACATCAC CGCCAGCGTT TTTGTCAATG ACAACGAATC CGGGTTATGG
CACGATTTCG AGCATTGGCT GGAAAAACTT GCGCCGCATG CGCCGATCTC ACAGTATCGC
CACAACGATA CCGGCGAAGA CAACGCCGAC GCGCACCTGA AACGCACCAT CATGGGGCGC
GAGGTGGTGC TGGCGATCAC CGACGGCAAG CTCGACCTCG GACCATGGGA AGAGGTGTTC
TACGGTGAGT TCGACGGTCA GCGGCGCAAA CGTGTGCTGA TAAAGATTAT CGGCGAATAG
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| Protein sequence | MRSYREELWF NTPTRVAFVR ITDQVAAAVR KSGVREGLCL VNAMHITASV FVNDNESGLW
HDFEHWLEKL APHAPISQYR HNDTGEDNAD AHLKRTIMGR EVVLAITDGK LDLGPWEEVF
YGEFDGQRRK RVLIKIIGE
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